Interactions for 1F2L — Binding Partner: CX3CL1


Structure details

  • Chemokine Chain: B
  • Partner Chain: A,C,D
Download Full PDB

3D view

NGL viewer powered by MMTF.


Chemokine diagram

Q A S C G K R A 30s-loop R Q H R 40s-loop D P K E 50s-loopC-term V T K C N I T C S K M T S K I P V A L N-term N Q Q Y H I L I I L E T A C F L Q W V K D A M Q H L D R Q
Pick color:
 
 
 
 
 
 
 
 
 
 
 
 


Interactions for this Binding Partner

Download list in excel
Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asn 9 64 CX SER 13 C HBAcceptor
Asn 9 64 CX SER 13 C VdWContact
Asn 9 64 CX CYS 12 C VdWContact
Asn 9 64 CX CYS 50 C VdWContact
Asn 9 64 CX LYS 14 C Hydrophobic
Asn 9 64 CX LYS 14 C HBAcceptor
Asn 9 64 CX LYS 14 C HBDonor
Asn 9 64 CX LYS 14 C VdWContact
Ile 10 65 CX LEU 48 C Hydrophobic
Ile 10 65 CX CYS 12 C Hydrophobic
Ile 10 65 CX THR 11 C VdWContact
Ile 10 65 CX ILE 10 C Hydrophobic
Ile 10 65 CX ILE 10 C VdWContact
Thr 11 66 CX THR 11 C Hydrophobic
Thr 11 66 CX THR 11 C HBAcceptor
Thr 11 66 CX THR 11 C HBDonor
Thr 11 66 CX THR 11 C VdWContact
Thr 11 66 CX ILE 10 C VdWContact
Cys 12 67 CX ASN 9 C VdWContact
Ser 13 68 N-loop ASN 9 C HBDonor
Ser 13 68 N-loop ASN 9 C VdWContact
Ser 13 68 N-loop CYS 8 C VdWContact
Lys 14 69 N-loop LYS 7 C Hydrophobic
Lys 14 69 N-loop LYS 7 C VdWContact
Lys 14 69 N-loop CYS 8 C HBDonor
Lys 14 69 N-loop CYS 8 C VdWContact
Ile 25 84 B1 LEU 23 A Hydrophobic
Ile 25 84 B1 ALA 22 A Hydrophobic
Gln 28 87 B1 LEU 48 C Hydrophobic
Gln 28 87 B1 LEU 48 C VdWContact
Gln 28 87 B1 HIS 46 C VdWContact
Ile 40 102 B2 LEU 48 C Hydrophobic
Ile 40 102 B2 ILE 10 C Hydrophobic
Arg 44 106 40s-loop ALA 22 A VdWContact
His 46 113 40s-loop ARG 44 A VdWContact
His 46 113 40s-loop HIS 26 C Hydrophobic
His 46 113 40s-loop HIS 26 C VdWContact
His 46 113 40s-loop ILE 25 C Hydrophobic
Leu 48 115 B3 LEU 48 C Hydrophobic
Leu 48 115 B3 GLN 28 C HBAcceptor
Leu 48 115 B3 GLN 28 C HBDonor
Leu 48 115 B3 GLN 28 C VdWContact
Leu 48 115 B3 ILE 40 C Hydrophobic
Leu 48 115 B3 ILE 10 C Hydrophobic
Cys 50 117 B3 ILE 10 C VdWContact
Gln 68 135 Helix PRO 20 A Hydrophobic
Gln 68 135 Helix PRO 20 A VdWContact

Interaction pattern search
Search complexes with similar interaction patterns:

Specify the minimum similarity (0.00 no similarity, 1.00 identical)