Interactions for 1F2L — Binding Partner: CX3CL1


Structure details

  • Chemokine Chain: C
  • Partner Chain: A,B,D
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Chemokine diagram

Q A S C G K R A 30s-loop R Q H R 40s-loop D P K E 50s-loopC-term V T K C N I T C S K M T S K I P V A L N-term N Q Q Y H I L I I L E T A C F L Q W V K D A M Q H L D R Q
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Lys 7 62 N-term LYS 14 B Hydrophobic
Lys 7 62 N-term LYS 14 B VdWContact
Cys 8 63 CX SER 13 B VdWContact
Cys 8 63 CX LYS 14 B HBAcceptor
Cys 8 63 CX LYS 14 B VdWContact
Asn 9 64 CX SER 13 B HBAcceptor
Asn 9 64 CX SER 13 B VdWContact
Asn 9 64 CX CYS 12 B VdWContact
Ile 10 65 CX THR 11 B VdWContact
Ile 10 65 CX ILE 40 B Hydrophobic
Ile 10 65 CX ILE 10 B Hydrophobic
Ile 10 65 CX ILE 10 B VdWContact
Ile 10 65 CX LEU 48 B Hydrophobic
Ile 10 65 CX CYS 50 B VdWContact
Thr 11 66 CX THR 11 B Hydrophobic
Thr 11 66 CX THR 11 B HBAcceptor
Thr 11 66 CX THR 11 B HBDonor
Thr 11 66 CX THR 11 B VdWContact
Thr 11 66 CX ILE 10 B VdWContact
Cys 12 67 CX ASN 9 B VdWContact
Cys 12 67 CX ILE 10 B Hydrophobic
Ser 13 68 N-loop ASN 9 B HBDonor
Ser 13 68 N-loop ASN 9 B VdWContact
Lys 14 69 N-loop ASN 9 B Hydrophobic
Lys 14 69 N-loop ASN 9 B HBAcceptor
Lys 14 69 N-loop ASN 9 B HBDonor
Lys 14 69 N-loop ASN 9 B VdWContact
Leu 23 82 N-loop LEU 72 D Hydrophobic
Ile 25 84 B1 HIS 46 B Hydrophobic
His 26 85 B1 HIS 46 B Hydrophobic
His 26 85 B1 HIS 46 B VdWContact
Gln 28 87 B1 LEU 48 B HBAcceptor
Gln 28 87 B1 LEU 48 B HBDonor
Gln 28 87 B1 LEU 48 B VdWContact
Ile 40 102 B2 LEU 48 B Hydrophobic
Thr 43 105 B2 LEU 72 D Hydrophobic
Arg 44 106 40s-loop HIS 46 A VdWContact
His 46 113 40s-loop ARG 44 A Hydrophobic
His 46 113 40s-loop HIS 46 A Hydrophobic
His 46 113 40s-loop GLN 28 B VdWContact
Arg 47 114 40s-loop ALA 69 D HBDonor
Arg 47 114 40s-loop ALA 69 D VdWContact
Leu 48 115 B3 ILE 40 B Hydrophobic
Leu 48 115 B3 ILE 10 B Hydrophobic
Leu 48 115 B3 LEU 48 B Hydrophobic
Leu 48 115 B3 GLN 28 B Hydrophobic
Leu 48 115 B3 GLN 28 B VdWContact
Phe 49 116 B3 LEU 72 D Hydrophobic
Phe 49 116 B3 LEU 72 D VdWContact
Cys 50 117 B3 ASN 9 B VdWContact

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