Interactions for 1F2L — Binding Partner: CX3CL1


Structure details

  • Chemokine Chain: D
  • Partner Chain: A,B,C
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Chemokine diagram

Q A S C G K R A 30s-loop R Q H R 40s-loop D P K E 50s-loopC-term V T K C N I T C S K M T S K I P V A L N-term N Q Q Y H I L I I L E T A C F L Q W V K D A M Q H L D R Q A A A L T R
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Lys 7 62 N-term LYS 14 A Hydrophobic
Lys 7 62 N-term LYS 14 A VdWContact
Asn 9 64 CX LYS 14 A Hydrophobic
Asn 9 64 CX LYS 14 A VdWContact
Ile 10 65 CX CYS 12 A Hydrophobic
Ile 10 65 CX CYS 12 A VdWContact
Ile 10 65 CX LEU 48 A Hydrophobic
Ile 10 65 CX ILE 10 A Hydrophobic
Ile 10 65 CX ILE 10 A VdWContact
Thr 11 66 CX THR 11 A HBAcceptor
Thr 11 66 CX THR 11 A HBDonor
Thr 11 66 CX THR 11 A VdWContact
Cys 12 67 CX ASN 9 A VdWContact
Ser 13 68 N-loop ASN 9 A HBDonor
Ser 13 68 N-loop ASN 9 A VdWContact
Ser 13 68 N-loop CYS 8 A VdWContact
Lys 14 69 N-loop ASN 9 A HBAcceptor
Lys 14 69 N-loop ASN 9 A VdWContact
Lys 14 69 N-loop LYS 7 A Hydrophobic
Lys 14 69 N-loop LYS 7 A VdWContact
Lys 14 69 N-loop CYS 8 A HBDonor
Lys 14 69 N-loop CYS 8 A VdWContact
Gln 28 87 B1 HIS 46 A HBDonor
Gln 28 87 B1 HIS 46 A VdWContact
Ile 40 102 B2 LEU 48 A Hydrophobic
Ile 40 102 B2 ILE 10 A Hydrophobic
His 46 113 40s-loop HIS 26 A Hydrophobic
His 46 113 40s-loop HIS 26 A VdWContact
Arg 47 114 40s-loop GLN 28 A VdWContact
Leu 48 115 B3 GLN 28 A HBAcceptor
Leu 48 115 B3 GLN 28 A HBDonor
Leu 48 115 B3 GLN 28 A VdWContact
Leu 48 115 B3 HIS 26 A Hydrophobic
Leu 48 115 B3 LEU 48 A Hydrophobic
Leu 48 115 B3 ILE 40 A Hydrophobic
Cys 50 117 B3 ASN 9 A HBAcceptor
Cys 50 117 B3 ASN 9 A HBDonor
Cys 50 117 B3 ASN 9 A VdWContact
Cys 50 117 B3 ILE 10 A VdWContact
Ala 69 136 C-term ARG 47 C HBAcceptor
Ala 69 136 C-term ARG 47 C VdWContact
Leu 72 139 C-term PHE 49 C Hydrophobic
Leu 72 139 C-term PHE 49 C VdWContact
Leu 72 139 C-term LEU 23 C Hydrophobic
Leu 72 139 C-term THR 43 C Hydrophobic

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