Interactions for 4R9Y — Binding Partner: KKO


Structure details

  • Chemokine Chain: A
  • Partner Chain: M,N
Download PDB

3D view

NGL viewer powered by MMTF.


Chemokine diagram

I K A G P H C P T A 30s-loop K N G R 40s-loop D L Q A 50s-loopC-term G D L Q C L C V K T T S Q V R P R N-term V E L S T I H Q L I A T L L C I K P L Y K K I I K K L L E S

Interactions for this Binding Partner

Download list as CSV
Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Gln 9 NTc.Cm1 N-term TYR 26 N VdWContact
Cys 12 CX.5 CX TYR 100 N Hydrophobic
Cys 12 CX.5 CX TYR 100 N VdWContact
Val 13 cxb1.1 N-loop ASN 30 N Hydrophobic
Ala 32 b1b2.7 30s-loop SER 81 M VdWContact
Gly 33 b1b2.8 30s-loop SER 81 M HBAcceptor
Gly 33 b1b2.8 30s-loop SER 81 M VdWContact
Pro 37 b1b2.13 30s-loop PRO 99 N Hydrophobic
Pro 37 b1b2.13 30s-loop SER 81 M HBAcceptor
Pro 37 b1b2.13 30s-loop SER 81 M VdWContact
Thr 38 b1b2.14 30s-loop TYR 100 N Hydrophobic
Thr 38 b1b2.14 30s-loop PRO 99 N Hydrophobic
Thr 38 b1b2.14 30s-loop TYR 74 M VdWContact
Asp 54 b3h.1 50s-loop TYR 104 N HBAcceptor
Asp 54 b3h.1 50s-loop TYR 104 N VdWContact
Leu 55 b3h.2 50s-loop TYR 100 N Hydrophobic
Leu 55 b3h.2 50s-loop TYR 100 N VdWContact
Leu 55 b3h.2 50s-loop TYR 104 N Hydrophobic
Leu 55 b3h.2 50s-loop TYR 104 N HBDonor
Leu 55 b3h.2 50s-loop TYR 104 N VdWContact
Leu 55 b3h.2 50s-loop TYR 74 M Hydrophobic
Leu 55 b3h.2 50s-loop TYR 74 M VdWContact
Gln 56 b3h.3 50s-loop TYR 116 M HBAcceptor
Gln 56 b3h.3 50s-loop SER 75 M HBAcceptor
Gln 56 b3h.3 50s-loop SER 75 M VdWContact
Gln 56 b3h.3 50s-loop TYR 78 M Hydrophobic
Gln 56 b3h.3 50s-loop ASN 57 M HBDonor
Gln 56 b3h.3 50s-loop ASN 57 M VdWContact
Gln 56 b3h.3 50s-loop THR 56 M Hydrophobic
Gln 56 b3h.3 50s-loop TYR 104 N Hydrophobic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)