Interactions for 1F9R — Binding Partner: CXCL4


Structure details

  • Chemokine Chain: A
  • Partner Chain: B,C,D
Download Full PDB

3D view

NGL viewer powered by MMTF.


Chemokine diagram

K A G P H C A V P Q 30s-loop K N G R 40s-loop D L Q A 50s-loopC-term G D L Q C L C V K T T S Q V R P R H N-term I V E L S T I L I A T L L C I K P L Y K K I I K K L L E S
Pick color:
 
 
 
 
 
 
 
 
 
 
 
 


Interactions for this Binding Partner

Download list in excel
Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Gly 6 59 N-term LYS 314 D VdWContact
Asp 7 60 N-term VAL 313 D HBAcceptor
Asp 7 60 N-term VAL 313 D VdWContact
Asp 7 60 N-term CYS 352 D HBAcceptor
Asp 7 60 N-term CYS 352 D VdWContact
Asp 7 60 N-term LYS 314 D HBAcceptor
Asp 7 60 N-term LYS 314 D Anionic
Asp 7 60 N-term LYS 314 D VdWContact
Asp 7 60 N-term THR 316 D HBAcceptor
Asp 7 60 N-term THR 316 D VdWContact
Leu 8 61 N-term LEU 311 D Hydrophobic
Leu 8 61 N-term LEU 311 D VdWContact
Leu 8 61 N-term CYS 352 D VdWContact
Leu 8 61 N-term ILE 342 D Hydrophobic
Leu 8 61 N-term LYS 350 D Hydrophobic
Gln 9 62 N-term LEU 311 D HBDonor
Gln 9 62 N-term LEU 311 D VdWContact
Gln 9 62 N-term VAL 313 D Hydrophobic
Gln 9 62 N-term CYS 310 D HBDonor
Gln 9 62 N-term CYS 310 D VdWContact
Cys 10 63 CX GLN 309 D HBAcceptor
Cys 10 63 CX GLN 309 D VdWContact
Leu 11 66 CX LEU 308 D Hydrophobic
Leu 11 66 CX LEU 308 D VdWContact
Leu 11 66 CX LEU 311 D Hydrophobic
Leu 11 66 CX LEU 311 D VdWContact
Leu 11 66 CX GLN 309 D HBAcceptor
Leu 11 66 CX GLN 309 D VdWContact
Val 13 68 N-loop GLN 309 D Hydrophobic
Val 13 68 N-loop GLN 309 D VdWContact
Val 13 68 N-loop ASP 307 D HBDonor
Val 13 68 N-loop ASP 307 D VdWContact
Lys 14 69 N-loop GLY 306 D VdWContact
Lys 14 69 N-loop ASP 307 D Cationic
Lys 14 69 N-loop ASP 307 D VdWContact
Thr 16 71 N-loop ASP 307 D HBDonor
Thr 16 71 N-loop ASP 307 D VdWContact
Thr 25 84 B1 LYS 131 B HBAcceptor
Thr 25 84 B1 LYS 131 B VdWContact
Thr 25 84 B1 ASN 247 C HBDonor
Thr 25 84 B1 ASN 247 C VdWContact
Ser 26 85 B1 VAL 129 B HBDonor
Ser 26 85 B1 VAL 129 B VdWContact
Leu 27 86 B1 VAL 129 B HBAcceptor
Leu 27 86 B1 VAL 129 B HBDonor
Leu 27 86 B1 VAL 129 B VdWContact
Glu 28 87 B1 GLU 128 B Hydrophobic
Val 29 88 B1 LEU 127 B HBAcceptor
Val 29 88 B1 LEU 127 B HBDonor
Val 29 88 B1 LEU 127 B VdWContact
Val 29 88 B1 LEU 168 B Hydrophobic
Val 29 88 B1 LEU 168 B VdWContact
Val 29 88 B1 SER 126 B VdWContact
Val 29 88 B1 LEU 167 B Hydrophobic
Lys 31 90 30s-loop THR 125 B HBDonor
Lys 31 90 30s-loop THR 125 B VdWContact
Lys 31 90 30s-loop SER 170 B VdWContact
Lys 31 90 30s-loop LEU 167 B Hydrophobic
Ala 32 91 30s-loop SER 170 B HBDonor
Ala 32 91 30s-loop SER 170 B VdWContact
Ala 39 99 30s-loop LEU 168 B Hydrophobic
Ala 39 99 30s-loop SER 170 B VdWContact
Leu 41 101 B2 LEU 168 B Hydrophobic
Leu 41 101 B2 LEU 168 B VdWContact
Ile 42 102 B2 LEU 308 D Hydrophobic
Gly 48 113 40s-loop LYS 246 C VdWContact
Lys 50 115 B3 LEU 308 D Hydrophobic
Cys 52 117 B3 ASP 307 D HBDonor
Cys 52 117 B3 ASP 307 D VdWContact
Tyr 60 125 Helix LEU 168 B Hydrophobic
Tyr 60 125 Helix LEU 168 B VdWContact
Ile 64 129 Helix ILE 164 B Hydrophobic
Leu 67 132 Helix LYS 131 B Hydrophobic
Leu 67 132 Helix LYS 131 B VdWContact
Leu 67 132 Helix VAL 129 B Hydrophobic
Leu 68 133 Helix VAL 129 B Hydrophobic
Leu 68 133 Helix TYR 160 B Hydrophobic
Leu 68 133 Helix TYR 160 B VdWContact
Leu 68 133 Helix LEU 141 B Hydrophobic
Ser 70 135 Helix PRO 139 B VdWContact
Ser 70 135 Helix ALA 132 B VdWContact

Interaction pattern search
Search complexes with similar interaction patterns:

Specify the minimum similarity (0.00 no similarity, 1.00 identical)