Interactions

5D65 | CCL3_HUMAN — CCL3

Residue contacts: 111
SUMMARY
Protein
CCL3_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P10147 View on UniProt
PDB ID
5D65 View on PDB
Method
X-ray
Resolution
3.1 Å
Date
April 20, 2016
Reference
10.1073/PNAS.1523981113 Open DOI
State
Oligomer
Chain information
Chemokine chain
B
Partner chain
A,C,D,E
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Leu 3 NTc.Cm8 N-term ALA 10 D Hydrophobic
Leu 3 NTc.Cm8 N-term ILE 41 D Hydrophobic
Leu 3 NTc.Cm8 N-term GLN 49 D VdWContact
Leu 3 NTc.Cm8 N-term PHE 29 D Hydrophobic
Leu 3 NTc.Cm8 N-term PHE 29 D VdWContact
Ala 5 NTc.Cm6 N-term GLU 30 D VdWContact
Ala 5 NTc.Cm6 N-term SER 32 D VdWContact
Asp 6 NTc.Cm5 N-term SER 33 D HBAcceptor
Asp 6 NTc.Cm5 N-term SER 33 D VdWContact
Asp 6 NTc.Cm5 N-term SER 14 C HBAcceptor
Asp 6 NTc.Cm5 N-term SER 14 C VdWContact
Asp 6 NTc.Cm5 N-term THR 16 C VdWContact
Asp 6 NTc.Cm5 N-term SER 32 D HBAcceptor
Asp 6 NTc.Cm5 N-term SER 32 D VdWContact
Asp 6 NTc.Cm5 N-term CYS 51 C HBAcceptor
Asp 6 NTc.Cm5 N-term CYS 51 C VdWContact
Pro 8 NTc.Cm3 N-term ALA 10 C Hydrophobic
Pro 8 NTc.Cm3 N-term GLN 49 C Hydrophobic
Pro 8 NTc.Cm3 N-term ILE 41 C Hydrophobic
Pro 8 NTc.Cm3 N-term ILE 41 C VdWContact
Pro 8 NTc.Cm3 N-term CYS 51 C VdWContact
Thr 9 NTc.Cm2 N-term CYS 11 C HBAcceptor
Thr 9 NTc.Cm2 N-term CYS 11 C HBDonor
Thr 9 NTc.Cm2 N-term CYS 11 C VdWContact
Thr 9 NTc.Cm2 N-term PHE 13 C Hydrophobic
Thr 9 NTc.Cm2 N-term PHE 13 C VdWContact
Thr 9 NTc.Cm2 N-term BGC 101 D HBDonor
Thr 9 NTc.Cm2 N-term BGC 101 D VdWContact
Ala 10 NTc.Cm1 N-term LEU 3 A Hydrophobic
Ala 10 NTc.Cm1 N-term PRO 8 C Hydrophobic
Ala 10 NTc.Cm1 N-term LEU 3 D Hydrophobic
Ala 10 NTc.Cm1 N-term LEU 3 D VdWContact
Cys 11 CX.1 CX THR 9 C HBAcceptor
Cys 11 CX.1 CX THR 9 C HBDonor
Cys 11 CX.1 CX THR 9 C VdWContact
Phe 13 cxb1.1 N-loop GLN 34 C Hydrophobic
Phe 13 cxb1.1 N-loop GLN 34 C VdWContact
Phe 13 cxb1.1 N-loop THR 9 C Hydrophobic
Phe 13 cxb1.1 N-loop THR 9 C VdWContact
Tyr 15 cxb1.5 N-loop SER 33 A HBAcceptor
Tyr 15 cxb1.5 N-loop SER 33 A VdWContact
Thr 16 cxb1.6 N-loop ASP 6 C VdWContact
Asn 23 cxb1.16 N-loop LEU 68 A Hydrophobic
Phe 24 B1.1 B1 GLU 67 A Hydrophobic
Phe 24 B1.1 B1 GLU 67 A VdWContact
Phe 24 B1.1 B1 LEU 68 A Hydrophobic
Phe 24 B1.1 B1 VAL 63 A Hydrophobic
Phe 24 B1.1 B1 SER 64 A VdWContact
Asp 27 B1.4 B1 ARG 48 E HBAcceptor
Asp 27 B1.4 B1 ARG 48 E Anionic
Asp 27 B1.4 B1 ARG 48 E VdWContact
Asp 27 B1.4 B1 ARG 46 E HBAcceptor
Asp 27 B1.4 B1 ARG 46 E Anionic
Asp 27 B1.4 B1 ARG 46 E VdWContact
Tyr 28 B1.5 B1 ARG 48 E PiCation
Tyr 28 B1.5 B1 ARG 48 E VdWContact
Tyr 28 B1.5 B1 ARG 46 E Hydrophobic
Phe 29 B1.6 B1 LEU 3 D Hydrophobic
Phe 29 B1.6 B1 ARG 48 E PiCation
Phe 29 B1.6 B1 ARG 48 E VdWContact
Glu 30 B1.7 B1 ALA 5 D VdWContact
Ser 32 b1b2.6 30s-loop ALA 5 D VdWContact
Ser 32 b1b2.6 30s-loop BGC 101 D HBAcceptor
Ser 32 b1b2.6 30s-loop BGC 101 D VdWContact
Ser 32 b1b2.6 30s-loop ASP 6 D HBDonor
Ser 32 b1b2.6 30s-loop ASP 6 D VdWContact
Ser 33 b1b2.9 30s-loop SER 17 E VdWContact
Ser 33 b1b2.9 30s-loop TYR 15 E HBDonor
Ser 33 b1b2.9 30s-loop TYR 15 E VdWContact
Ser 33 b1b2.9 30s-loop ASP 6 D HBDonor
Ser 33 b1b2.9 30s-loop ASP 6 D VdWContact
Gln 34 b1b2.10 30s-loop PHE 13 C Hydrophobic
Gln 34 b1b2.10 30s-loop PHE 13 C VdWContact
Cys 35 b1b2.12 30s-loop GLC 101 E VdWContact
Pro 38 b1b2.16 30s-loop GLC 101 E VdWContact
Ile 41 B2.3 B2 PRO 8 C Hydrophobic
Ile 41 B2.3 B2 LEU 3 D Hydrophobic
Thr 44 B2.6 B2 GLU 67 A HBDonor
Thr 44 B2.6 B2 GLU 67 A VdWContact
Lys 45 b2b3.2 40s-loop GLU 67 A VdWContact
Arg 46 b2b3.4 40s-loop GLU 67 A Hydrophobic
Arg 46 b2b3.4 40s-loop GLU 67 A HBDonor
Arg 46 b2b3.4 40s-loop GLU 67 A VdWContact
Arg 46 b2b3.4 40s-loop TYR 28 A Hydrophobic
Arg 46 b2b3.4 40s-loop ASP 27 A HBDonor
Arg 46 b2b3.4 40s-loop ASP 27 A Cationic
Arg 46 b2b3.4 40s-loop ASP 27 A VdWContact
Arg 46 b2b3.4 40s-loop LEU 66 A HBDonor
Arg 46 b2b3.4 40s-loop LEU 66 A VdWContact
Arg 46 b2b3.4 40s-loop ALA 26 A VdWContact
Arg 46 b2b3.4 40s-loop BGC 101 A HBDonor
Arg 46 b2b3.4 40s-loop BGC 101 A VdWContact
Arg 48 b2b3.12 40s-loop ASP 27 A HBDonor
Arg 48 b2b3.12 40s-loop ASP 27 A Cationic
Arg 48 b2b3.12 40s-loop ASP 27 A VdWContact
Arg 48 b2b3.12 40s-loop TYR 28 A HBDonor
Arg 48 b2b3.12 40s-loop TYR 28 A VdWContact
Gln 49 B3.1 B3 THR 7 C Hydrophobic
Gln 49 B3.1 B3 LEU 3 D VdWContact
Cys 51 B3.3 B3 PRO 8 C VdWContact
Cys 51 B3.3 B3 ASP 6 C HBDonor
Cys 51 B3.3 B3 ASP 6 C VdWContact
Val 63 H.7 Helix PHE 24 E Hydrophobic
Ser 64 H.8 Helix PHE 24 E VdWContact
Leu 66 H.10 Helix ARG 46 E HBAcceptor
Leu 66 H.10 Helix ARG 46 E VdWContact
Glu 67 CT.1 C-term PHE 24 E Hydrophobic
Glu 67 CT.1 C-term LYS 45 E VdWContact
Glu 67 CT.1 C-term ARG 46 E HBAcceptor
Glu 67 CT.1 C-term ARG 46 E VdWContact
Leu 68 CT.2 C-term PHE 24 E Hydrophobic
CHEMOKINE DIAGRAM
T S S Q C S K P 30s-loop K R S R 40s-loop D P S E 50s-loopC-term L A A D T P T A C C F S Y T S R Q I P Q N N-term E F Y D A I F G V I F L T A C V Q E W V Q K Y V S D L E L S
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical