Interactions

5D65 | CCL3_HUMAN — CCL3

Residue contacts: 60
SUMMARY
Protein
CCL3_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P10147 View on UniProt
PDB ID
5D65 View on PDB
Method
X-ray
Resolution
3.1 Å
Date
April 20, 2016
Reference
10.1073/PNAS.1523981113 Open DOI
State
Oligomer
Chain information
Chemokine chain
E
Partner chain
A,B,C,D
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 6 NTc.Cm5 N-term SER 14 D HBAcceptor
Asp 6 NTc.Cm5 N-term SER 14 D VdWContact
Asp 6 NTc.Cm5 N-term VAL 50 D Hydrophobic
Asp 6 NTc.Cm5 N-term THR 16 D VdWContact
Pro 8 NTc.Cm3 N-term ILE 41 D Hydrophobic
Pro 8 NTc.Cm3 N-term ILE 41 D VdWContact
Pro 8 NTc.Cm3 N-term ALA 10 D Hydrophobic
Pro 8 NTc.Cm3 N-term ALA 10 D VdWContact
Pro 8 NTc.Cm3 N-term GLN 49 D Hydrophobic
Thr 9 NTc.Cm2 N-term PHE 13 D Hydrophobic
Thr 9 NTc.Cm2 N-term PHE 13 D VdWContact
Thr 9 NTc.Cm2 N-term CYS 11 D HBAcceptor
Thr 9 NTc.Cm2 N-term CYS 11 D HBDonor
Thr 9 NTc.Cm2 N-term CYS 11 D VdWContact
Ala 10 NTc.Cm1 N-term PRO 8 D Hydrophobic
Cys 11 CX.1 CX PRO 8 D VdWContact
Cys 11 CX.1 CX THR 9 D HBAcceptor
Cys 11 CX.1 CX THR 9 D HBDonor
Cys 11 CX.1 CX THR 9 D VdWContact
Cys 11 CX.1 CX PHE 13 D VdWContact
Phe 13 cxb1.1 N-loop THR 9 D Hydrophobic
Phe 13 cxb1.1 N-loop THR 9 D VdWContact
Phe 13 cxb1.1 N-loop GLN 34 D Hydrophobic
Phe 13 cxb1.1 N-loop GLN 34 D VdWContact
Ser 14 cxb1.2 N-loop BGC 101 D HBAcceptor
Ser 14 cxb1.2 N-loop BGC 101 D VdWContact
Tyr 15 cxb1.5 N-loop SER 33 B HBAcceptor
Tyr 15 cxb1.5 N-loop SER 33 B VdWContact
Thr 16 cxb1.6 N-loop ASP 6 D VdWContact
Ser 17 cxb1.7 N-loop SER 33 B VdWContact
Phe 24 B1.1 B1 VAL 63 B Hydrophobic
Phe 24 B1.1 B1 GLU 67 B Hydrophobic
Phe 24 B1.1 B1 LEU 68 B Hydrophobic
Phe 24 B1.1 B1 SER 64 B VdWContact
Gln 34 b1b2.10 30s-loop PHE 13 D Hydrophobic
Gln 34 b1b2.10 30s-loop PHE 13 D VdWContact
Ile 41 B2.3 B2 PRO 8 D Hydrophobic
Ile 41 B2.3 B2 PRO 8 D VdWContact
Lys 45 b2b3.2 40s-loop GLU 67 B VdWContact
Arg 46 b2b3.4 40s-loop LEU 66 B HBDonor
Arg 46 b2b3.4 40s-loop LEU 66 B VdWContact
Arg 46 b2b3.4 40s-loop ASP 27 B HBDonor
Arg 46 b2b3.4 40s-loop ASP 27 B Cationic
Arg 46 b2b3.4 40s-loop ASP 27 B VdWContact
Arg 46 b2b3.4 40s-loop TYR 28 B Hydrophobic
Arg 46 b2b3.4 40s-loop GLU 67 B HBDonor
Arg 46 b2b3.4 40s-loop GLU 67 B VdWContact
Arg 48 b2b3.12 40s-loop ASP 27 B HBDonor
Arg 48 b2b3.12 40s-loop ASP 27 B Cationic
Arg 48 b2b3.12 40s-loop ASP 27 B VdWContact
Arg 48 b2b3.12 40s-loop TYR 28 B CationPi
Arg 48 b2b3.12 40s-loop TYR 28 B VdWContact
Arg 48 b2b3.12 40s-loop PHE 29 B CationPi
Arg 48 b2b3.12 40s-loop PHE 29 B VdWContact
Gln 49 B3.1 B3 PRO 8 D Hydrophobic
Gln 49 B3.1 B3 THR 7 D Hydrophobic
Gln 49 B3.1 B3 THR 7 D VdWContact
Val 50 B3.2 B3 ASP 6 D Hydrophobic
Cys 51 B3.3 B3 ASP 6 D HBDonor
Cys 51 B3.3 B3 ASP 6 D VdWContact
CHEMOKINE DIAGRAM
T S S Q C S K P 30s-loop K R S R 40s-loop D P S E 50s-loopC-term A S L A A D T P T A C C F S Y T S R Q I P Q N N-term E F Y D A I F G V I F L T A C V Q E W V Q K Y V S D L E L S
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical