Interactions for 1F9S — Binding Partner: CXCL4


Structure details

  • Chemokine Chain: D
  • Partner Chain: A,B,C
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Chemokine diagram

K A G P H C P T A Q 30s-loop K N G S 40s-loop D L Q A 50s-loopC-term G D L Q C L C V K T T S Q V R P R H N-term I V E L S T I L I A T L L C I K P L Y K K I I K K L L E S
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 307 60 N-term LYS 14 A Hydrophobic
Asp 307 60 N-term LYS 14 A Anionic
Asp 307 60 N-term LYS 14 A VdWContact
Asp 307 60 N-term VAL 13 A HBAcceptor
Asp 307 60 N-term VAL 13 A VdWContact
Asp 307 60 N-term CYS 52 A Hydrophobic
Asp 307 60 N-term CYS 52 A HBAcceptor
Asp 307 60 N-term CYS 52 A VdWContact
Asp 307 60 N-term THR 16 A HBAcceptor
Asp 307 60 N-term THR 16 A VdWContact
Leu 308 61 N-term LYS 50 A Hydrophobic
Leu 308 61 N-term LEU 11 A Hydrophobic
Leu 308 61 N-term LEU 11 A VdWContact
Leu 308 61 N-term ILE 42 A Hydrophobic
Gln 309 62 N-term GLN 9 A Hydrophobic
Gln 309 62 N-term GLN 9 A VdWContact
Gln 309 62 N-term CYS 10 A HBDonor
Gln 309 62 N-term CYS 10 A VdWContact
Gln 309 62 N-term LEU 11 A HBDonor
Gln 309 62 N-term LEU 11 A VdWContact
Cys 310 63 CX GLN 9 A HBAcceptor
Cys 310 63 CX GLN 9 A VdWContact
Leu 311 66 CX GLN 9 A HBAcceptor
Leu 311 66 CX GLN 9 A VdWContact
Leu 311 66 CX LEU 8 A Hydrophobic
Leu 311 66 CX LEU 8 A VdWContact
Leu 311 66 CX LEU 11 A Hydrophobic
Leu 311 66 CX LEU 11 A VdWContact
Val 313 68 N-loop ASP 7 A HBDonor
Val 313 68 N-loop ASP 7 A VdWContact
Val 313 68 N-loop GLN 9 A Hydrophobic
Lys 314 69 N-loop ASP 7 A HBDonor
Thr 315 70 N-loop ASP 7 A VdWContact
Thr 316 71 N-loop ASP 7 A HBDonor
Thr 316 71 N-loop ASP 7 A VdWContact
Thr 325 84 B1 ASN 147 B HBDonor
Thr 325 84 B1 ASN 147 B VdWContact
Thr 325 84 B1 LYS 231 C HBAcceptor
Thr 325 84 B1 LYS 231 C VdWContact
Ser 326 85 B1 VAL 229 C VdWContact
Ser 326 85 B1 GLU 228 C HBDonor
Ser 326 85 B1 GLU 228 C VdWContact
Leu 327 86 B1 VAL 229 C Hydrophobic
Leu 327 86 B1 VAL 229 C HBAcceptor
Leu 327 86 B1 VAL 229 C HBDonor
Leu 327 86 B1 VAL 229 C VdWContact
Glu 328 87 B1 GLU 228 C Hydrophobic
Val 329 88 B1 LEU 227 C Hydrophobic
Val 329 88 B1 LEU 227 C HBAcceptor
Val 329 88 B1 LEU 227 C HBDonor
Val 329 88 B1 LEU 227 C VdWContact
Val 329 88 B1 LEU 268 C Hydrophobic
Val 329 88 B1 SER 226 C VdWContact
Val 329 88 B1 LEU 267 C Hydrophobic
Lys 331 90 30s-loop THR 225 C HBDonor
Lys 331 90 30s-loop THR 225 C VdWContact
Lys 331 90 30s-loop LEU 267 C Hydrophobic
Lys 331 90 30s-loop LEU 267 C VdWContact
Ala 332 91 30s-loop SER 270 C HBDonor
Ala 332 91 30s-loop SER 270 C VdWContact
Ala 339 99 30s-loop LEU 268 C Hydrophobic
Leu 341 101 B2 LEU 268 C Hydrophobic
Leu 341 101 B2 LEU 268 C VdWContact
Ile 342 102 B2 LEU 8 A Hydrophobic
Gly 348 113 40s-loop LYS 146 B VdWContact
Lys 350 115 B3 LEU 8 A Hydrophobic
Lys 350 115 B3 LEU 8 A VdWContact
Cys 352 117 B3 ASP 7 A Hydrophobic
Cys 352 117 B3 ASP 7 A HBDonor
Cys 352 117 B3 ASP 7 A VdWContact
Tyr 360 125 Helix LEU 268 C Hydrophobic
Tyr 360 125 Helix LEU 268 C VdWContact
Ile 364 129 Helix VAL 229 C Hydrophobic
Ile 364 129 Helix ILE 264 C Hydrophobic
Ile 364 129 Helix ILE 264 C VdWContact
Lys 366 131 Helix LYS 231 C HBAcceptor
Leu 367 132 Helix VAL 229 C Hydrophobic
Leu 367 132 Helix LYS 231 C Hydrophobic
Leu 367 132 Helix LYS 231 C VdWContact
Leu 368 133 Helix VAL 229 C Hydrophobic
Leu 368 133 Helix VAL 229 C VdWContact
Leu 368 133 Helix LEU 255 C Hydrophobic
Leu 368 133 Helix LEU 255 C VdWContact
Leu 368 133 Helix TYR 260 C Hydrophobic
Leu 368 133 Helix ALA 239 C Hydrophobic
Leu 368 133 Helix LEU 241 C Hydrophobic
Leu 368 133 Helix LEU 241 C VdWContact
Ser 370 135 Helix ALA 232 C VdWContact
Ser 370 135 Helix ALA 239 C VdWContact

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