Interactions for 4RAU — Binding Partner: RTOFab


Structure details

  • Chemokine Chain: X
  • Partner Chain: V,W
Download PDB

3D view

NGL viewer powered by MMTF.


Chemokine diagram

I K A G P H C P T A 30s-loop K N G R 40s-loop D L Q A 50s-loopC-term E D G D L Q C L C V K T T S Q V R P R N-term V E L S T I H Q L I A T L L C I K P L Y K K I I K K L L E

Interactions for this Binding Partner

Download list as CSV
Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 7 NTc.Cm3 N-term LYS 95 V HBAcceptor
Asp 7 NTc.Cm3 N-term LYS 95 V Anionic
Asp 7 NTc.Cm3 N-term LYS 95 V VdWContact
Lys 31 b1b2.6 30s-loop SER 55 W VdWContact
Ala 32 b1b2.7 30s-loop LEU 103 W HBDonor
Ala 32 b1b2.7 30s-loop LEU 103 W VdWContact
Ala 32 b1b2.7 30s-loop TYR 106 W Hydrophobic
Ala 32 b1b2.7 30s-loop TYR 106 W VdWContact
Gly 33 b1b2.8 30s-loop TYR 106 W VdWContact
Pro 34 b1b2.9 30s-loop TYR 61 W Hydrophobic
Pro 34 b1b2.9 30s-loop LEU 96 V Hydrophobic
Pro 34 b1b2.9 30s-loop TYR 98 V Hydrophobic
Pro 34 b1b2.9 30s-loop TYR 98 V VdWContact
His 35 b1b2.10 30s-loop TYR 61 W Hydrophobic
His 35 b1b2.10 30s-loop TYR 61 W VdWContact
Pro 37 b1b2.13 30s-loop TYR 34 V Hydrophobic
Pro 37 b1b2.13 30s-loop TYR 34 V VdWContact
Pro 37 b1b2.13 30s-loop PHE 93 V Hydrophobic
Pro 37 b1b2.13 30s-loop PHE 93 V VdWContact
Thr 38 b1b2.14 30s-loop LEU 104 W VdWContact
Ala 39 b1b2.16 30s-loop LEU 103 W VdWContact
Ala 39 b1b2.16 30s-loop LEU 104 W HBDonor
Ala 39 b1b2.16 30s-loop LEU 104 W VdWContact
Ile 63 H.6 Helix LEU 104 W Hydrophobic
Glu 69 CT.2 C-term ARG 33 W VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)