Interactions for 4XT1 — Binding Partner: US28


Structure details

  • Chemokine Chain: B
  • Partner Chain: A
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Chemokine diagram

K R A I I L E T R 30s-loop A D P 40s-loop V K D A 50s-loopC-term H H G V T K C A I T C S K M T S K I P V A L L I H Y Q N-term G C S A Q N Q Q H R L F C W Q E K M Q H L D R Q

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
His 2 NTc.Cm12 N-term GLU 277 A VdWContact
His 2 NTc.Cm12 N-term PHE 111 A Hydrophobic
His 2 NTc.Cm12 N-term PHE 111 A PiStacking
His 2 NTc.Cm12 N-term PHE 281 A PiStacking
His 2 NTc.Cm12 N-term TRP 89 A Hydrophobic
His 2 NTc.Cm12 N-term TRP 89 A PiStacking
His 2 NTc.Cm12 N-term TRP 89 A VdWContact
His 2 NTc.Cm12 N-term TYR 40 A VdWContact
His 3 NTc.Cm11 N-term GLU 277 A HBDonor
His 3 NTc.Cm11 N-term GLU 277 A VdWContact
His 3 NTc.Cm11 N-term LEU 273 A Hydrophobic
His 3 NTc.Cm11 N-term LEU 273 A VdWContact
His 3 NTc.Cm11 N-term LEU 248 A Hydrophobic
His 3 NTc.Cm11 N-term ILE 274 A Hydrophobic
His 3 NTc.Cm11 N-term ILE 274 A VdWContact
Gly 4 NTc.Cm10 N-term GLU 277 A HBDonor
Gly 4 NTc.Cm10 N-term GLU 277 A VdWContact
Val 5 NTc.Cm9 N-term LEU 93 A Hydrophobic
Val 5 NTc.Cm9 N-term LEU 93 A VdWContact
Val 5 NTc.Cm9 N-term TYR 92 A Hydrophobic
Val 5 NTc.Cm9 N-term TRP 89 A Hydrophobic
Val 5 NTc.Cm9 N-term TRP 89 A VdWContact
Lys 7 NTc.Cm7 N-term TYR 92 A HBDonor
Lys 7 NTc.Cm7 N-term TYR 92 A VdWContact
Lys 7 NTc.Cm7 N-term GLN 172 A Hydrophobic
Asn 9 NTc.Cm5 N-term VAL 24 A VdWContact
Asn 9 NTc.Cm5 N-term PHE 25 A HBAcceptor
Asn 9 NTc.Cm5 N-term PHE 25 A VdWContact
Asn 9 NTc.Cm5 N-term LEU 29 A Hydrophobic
Ile 10 NTc.Cm4 N-term VAL 24 A Hydrophobic
Ile 10 NTc.Cm4 N-term VAL 24 A VdWContact
Ile 10 NTc.Cm4 N-term PRO 22 A Hydrophobic
Thr 11 NTc.Cm3 N-term CYS 23 A HBAcceptor
Thr 11 NTc.Cm3 N-term CYS 23 A HBDonor
Thr 11 NTc.Cm3 N-term CYS 23 A VdWContact
Thr 11 NTc.Cm3 N-term PHE 25 A Hydrophobic
Thr 11 NTc.Cm3 N-term PHE 25 A VdWContact
Met 15 CX.2 CX GLU 18 A VdWContact
Thr 16 CX.3 CX ALA 20 A Hydrophobic
Thr 16 CX.3 CX GLU 18 A Hydrophobic
Ser 17 CX.4 CX ASP 15 A VdWContact
Lys 18 CX.5 CX ASP 15 A HBDonor
Lys 18 CX.5 CX ASP 15 A VdWContact
Gln 31 B1.3 B1 GLN 172 A HBAcceptor
Gln 31 B1.3 B1 GLN 172 A VdWContact
Ala 32 B1.4 B1 GLN 172 A Hydrophobic
Ala 32 B1.4 B1 GLN 172 A VdWContact
Ala 32 B1.4 B1 ASP 170 A Hydrophobic
Ala 32 B1.4 B1 LYS 169 A Hydrophobic
Ala 32 B1.4 B1 MET 174 A VdWContact
Ser 33 B1.5 B1 GLN 172 A HBDonor
Ser 33 B1.5 B1 GLN 172 A VdWContact
Ser 33 B1.5 B1 MET 174 A VdWContact
Gly 35 B1.7 B1 TYR 177 A HBAcceptor
Gly 35 B1.7 B1 TYR 177 A VdWContact
Gly 35 B1.7 B1 THR 175 A VdWContact
Gly 35 B1.7 B1 MET 174 A VdWContact
Lys 36 b1b2.4 30s-loop ASP 178 A VdWContact
Arg 37 b1b2.6 30s-loop ASP 178 A HBDonor
Arg 37 b1b2.6 30s-loop ASP 178 A VdWContact
Leu 48 B2.4 B2 PRO 22 A Hydrophobic
Leu 48 B2.4 B2 PRO 22 A VdWContact
Cys 50 B2.6 B2 ALA 20 A HBDonor
Cys 50 B2.6 B2 ALA 20 A VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)