Interactions for 5CBA — Binding Partner: 3b4


Structure details

  • Chemokine Chain: E
  • Partner Chain: A,B
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Chemokine diagram

L P R G N G C P R K 30s-loop K N K S 40s-loop D P Q A 50s-loopC-term R C R C V Q E S S V F I P R R N-term I Q I R D I F E I I V W K V C V I E W I Q R M M E V L R

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Phe 18 cxb1.10 N-loop PHE 54 A Hydrophobic
Arg 21 cxb1.15 N-loop GLU 95 A Cationic
Arg 21 cxb1.15 N-loop ASP 97 A HBDonor
Arg 21 cxb1.15 N-loop ASP 97 A Cationic
Arg 21 cxb1.15 N-loop EDO 201 A VdWContact
Arg 21 cxb1.15 N-loop PRO 96 A VdWContact
Arg 21 cxb1.15 N-loop ASP 100 A Cationic
Arg 21 cxb1.15 N-loop PRO 100 A Hydrophobic
Arg 21 cxb1.15 N-loop ILE 100 A VdWContact
Arg 21 cxb1.15 N-loop ILE 52 A Hydrophobic
Arg 22 cxb1.16 N-loop EDO 201 A VdWContact
Arg 22 cxb1.16 N-loop TYR 91 B Hydrophobic
Arg 22 cxb1.16 N-loop ASP 95 B Cationic
Ile 24 B1.2 B1 PRO 100 A Hydrophobic
Asp 25 B1.3 B1 TYR 30 B HBAcceptor
Asp 25 B1.3 B1 TYR 30 B VdWContact
Arg 26 B1.4 B1 SER 100 A VdWContact
Arg 26 B1.4 B1 TYR 100 A Hydrophobic
Arg 26 B1.4 B1 TYR 100 A VdWContact
Ile 27 B1.5 B1 TYR 100 A Hydrophobic
Ile 27 B1.5 B1 TYR 100 A HBAcceptor
Ile 27 B1.5 B1 TYR 100 A HBDonor
Ile 27 B1.5 B1 TYR 100 A VdWContact
Gln 28 B1.6 B1 SER 100 A HBDonor
Gln 28 B1.6 B1 SER 100 A VdWContact
Lys 46 b2b3.2 40s-loop TRP 32 B Hydrophobic
Lys 46 b2b3.2 40s-loop ASP 100 A Cationic
Lys 46 b2b3.2 40s-loop TYR 30 B Hydrophobic
Lys 46 b2b3.2 40s-loop TYR 30 B VdWContact
Lys 48 b2b3.11 40s-loop TYR 30 B HBDonor
Lys 48 b2b3.11 40s-loop TYR 30 B VdWContact
Trp 59 H.2 Helix PHE 54 A Hydrophobic
Trp 59 H.2 Helix PHE 54 A VdWContact
Arg 62 H.5 Helix ILE 53 A Hydrophobic
Arg 62 H.5 Helix ILE 53 A VdWContact
Met 63 H.6 Helix PHE 54 A Hydrophobic
Met 63 H.6 Helix PHE 54 A VdWContact
Met 63 H.6 Helix TYR 100 A Hydrophobic
Met 63 H.6 Helix SER 31 A VdWContact
Val 66 H.9 Helix SER 30 A VdWContact
Val 66 H.9 Helix ILE 53 A Hydrophobic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)