Interactions for 1F9S — Binding Partner: CXCL4
Structure details
- PDB ID: 1F9S open_in_new
- Protein: CXCL4_HUMAN
- Organism: Homo sapiens
- UniProt ID: P02776 open_in_new
- Method: X-ray
- Resolution: 2.38 Å
- Date: Aug. 26, 2003
- Reference: open_in_new
- State: Tetramer
- Chemokine Chain: A
- Partner Chain: B,C,D
Chemokine diagram
Interactions for this Binding Partner
Download list as CSV
| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Asp 7 | NTc.Cm3 | N-term | VAL 313 | D | HBAcceptor |
| Asp 7 | NTc.Cm3 | N-term | VAL 313 | D | VdWContact |
| Asp 7 | NTc.Cm3 | N-term | LYS 314 | D | HBAcceptor |
| Asp 7 | NTc.Cm3 | N-term | CYS 352 | D | Hydrophobic |
| Asp 7 | NTc.Cm3 | N-term | CYS 352 | D | HBAcceptor |
| Asp 7 | NTc.Cm3 | N-term | CYS 352 | D | VdWContact |
| Asp 7 | NTc.Cm3 | N-term | THR 316 | D | HBAcceptor |
| Asp 7 | NTc.Cm3 | N-term | THR 316 | D | VdWContact |
| Asp 7 | NTc.Cm3 | N-term | THR 315 | D | VdWContact |
| Leu 8 | NTc.Cm2 | N-term | ILE 342 | D | Hydrophobic |
| Leu 8 | NTc.Cm2 | N-term | LEU 311 | D | Hydrophobic |
| Leu 8 | NTc.Cm2 | N-term | LEU 311 | D | VdWContact |
| Leu 8 | NTc.Cm2 | N-term | LYS 350 | D | Hydrophobic |
| Leu 8 | NTc.Cm2 | N-term | LYS 350 | D | VdWContact |
| Gln 9 | NTc.Cm1 | N-term | GLN 309 | D | Hydrophobic |
| Gln 9 | NTc.Cm1 | N-term | GLN 309 | D | VdWContact |
| Gln 9 | NTc.Cm1 | N-term | LEU 311 | D | HBDonor |
| Gln 9 | NTc.Cm1 | N-term | LEU 311 | D | VdWContact |
| Gln 9 | NTc.Cm1 | N-term | VAL 313 | D | Hydrophobic |
| Gln 9 | NTc.Cm1 | N-term | CYS 310 | D | HBDonor |
| Gln 9 | NTc.Cm1 | N-term | CYS 310 | D | VdWContact |
| Cys 10 | CX.1 | CX | GLN 309 | D | HBAcceptor |
| Cys 10 | CX.1 | CX | GLN 309 | D | VdWContact |
| Leu 11 | CX.4 | CX | LEU 311 | D | Hydrophobic |
| Leu 11 | CX.4 | CX | LEU 311 | D | VdWContact |
| Leu 11 | CX.4 | CX | GLN 309 | D | HBAcceptor |
| Leu 11 | CX.4 | CX | GLN 309 | D | VdWContact |
| Leu 11 | CX.4 | CX | LEU 308 | D | Hydrophobic |
| Leu 11 | CX.4 | CX | LEU 308 | D | VdWContact |
| Val 13 | cxb1.1 | N-loop | ASP 307 | D | HBDonor |
| Val 13 | cxb1.1 | N-loop | ASP 307 | D | VdWContact |
| Lys 14 | cxb1.2 | N-loop | ASP 307 | D | Hydrophobic |
| Lys 14 | cxb1.2 | N-loop | ASP 307 | D | Cationic |
| Lys 14 | cxb1.2 | N-loop | ASP 307 | D | VdWContact |
| Thr 16 | cxb1.6 | N-loop | ASP 307 | D | HBDonor |
| Thr 16 | cxb1.6 | N-loop | ASP 307 | D | VdWContact |
| Thr 25 | B1.3 | B1 | LYS 131 | B | HBAcceptor |
| Thr 25 | B1.3 | B1 | LYS 131 | B | VdWContact |
| Thr 25 | B1.3 | B1 | ASN 247 | C | HBDonor |
| Thr 25 | B1.3 | B1 | ASN 247 | C | VdWContact |
| Ser 26 | B1.4 | B1 | VAL 129 | B | VdWContact |
| Leu 27 | B1.5 | B1 | VAL 129 | B | Hydrophobic |
| Leu 27 | B1.5 | B1 | VAL 129 | B | HBAcceptor |
| Leu 27 | B1.5 | B1 | VAL 129 | B | HBDonor |
| Leu 27 | B1.5 | B1 | VAL 129 | B | VdWContact |
| Leu 27 | B1.5 | B1 | GLU 128 | B | VdWContact |
| Glu 28 | B1.6 | B1 | LEU 127 | B | VdWContact |
| Glu 28 | B1.6 | B1 | GLU 128 | B | Hydrophobic |
| Val 29 | B1.7 | B1 | LEU 168 | B | Hydrophobic |
| Val 29 | B1.7 | B1 | LEU 168 | B | VdWContact |
| Val 29 | B1.7 | B1 | ILE 164 | B | Hydrophobic |
| Val 29 | B1.7 | B1 | SER 126 | B | VdWContact |
| Val 29 | B1.7 | B1 | LEU 127 | B | HBAcceptor |
| Val 29 | B1.7 | B1 | LEU 127 | B | HBDonor |
| Val 29 | B1.7 | B1 | LEU 127 | B | VdWContact |
| Val 29 | B1.7 | B1 | LEU 167 | B | Hydrophobic |
| Lys 31 | b1b2.6 | 30s-loop | THR 125 | B | HBDonor |
| Lys 31 | b1b2.6 | 30s-loop | THR 125 | B | VdWContact |
| Lys 31 | b1b2.6 | 30s-loop | LEU 167 | B | Hydrophobic |
| Lys 31 | b1b2.6 | 30s-loop | LEU 167 | B | VdWContact |
| Ala 32 | b1b2.7 | 30s-loop | SER 170 | B | HBDonor |
| Ala 32 | b1b2.7 | 30s-loop | SER 170 | B | VdWContact |
| Ala 39 | b1b2.16 | 30s-loop | LEU 168 | B | Hydrophobic |
| Ala 39 | b1b2.16 | 30s-loop | LEU 168 | B | VdWContact |
| Leu 41 | B2.2 | B2 | LEU 168 | B | Hydrophobic |
| Leu 41 | B2.2 | B2 | LEU 168 | B | VdWContact |
| Ile 42 | B2.3 | B2 | LEU 308 | D | Hydrophobic |
| Gly 48 | b2b3.11 | 40s-loop | LYS 246 | C | HBAcceptor |
| Gly 48 | b2b3.11 | 40s-loop | LYS 246 | C | VdWContact |
| Lys 50 | B3.1 | B3 | LEU 308 | D | Hydrophobic |
| Cys 52 | B3.3 | B3 | ASP 307 | D | Hydrophobic |
| Cys 52 | B3.3 | B3 | ASP 307 | D | HBDonor |
| Cys 52 | B3.3 | B3 | ASP 307 | D | VdWContact |
| Leu 55 | b3h.2 | 50s-loop | LEU 168 | B | Hydrophobic |
| Tyr 60 | H.3 | Helix | LEU 168 | B | Hydrophobic |
| Tyr 60 | H.3 | Helix | LEU 168 | B | VdWContact |
| Tyr 60 | H.3 | Helix | ILE 164 | B | Hydrophobic |
| Lys 61 | H.4 | Helix | LYS 165 | B | VdWContact |
| Ile 64 | H.7 | Helix | ILE 164 | B | Hydrophobic |
| Ile 64 | H.7 | Helix | ILE 164 | B | VdWContact |
| Leu 67 | H.10 | Helix | VAL 129 | B | Hydrophobic |
| Leu 67 | H.10 | Helix | LYS 131 | B | Hydrophobic |
| Leu 67 | H.10 | Helix | LYS 131 | B | VdWContact |
| Leu 68 | CT.1 | C-term | VAL 129 | B | Hydrophobic |
| Leu 68 | CT.1 | C-term | VAL 129 | B | VdWContact |
| Leu 68 | CT.1 | C-term | TYR 160 | B | Hydrophobic |
| Leu 68 | CT.1 | C-term | TYR 160 | B | VdWContact |
| Leu 68 | CT.1 | C-term | LEU 141 | B | Hydrophobic |
| Leu 68 | CT.1 | C-term | ALA 139 | B | Hydrophobic |
| Ser 70 | CT.3 | C-term | ALA 132 | B | HBAcceptor |
| Ser 70 | CT.3 | C-term | ALA 132 | B | VdWContact |
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