Interactions for 1RHP — Binding Partner: CXCL4


Structure details

  • Chemokine Chain: B
  • Partner Chain: A,C,D
Download Full PDB

3D view

NGL viewer powered by MMTF.


Chemokine diagram

K A G P H C P T A Q 30s-loop K N G R 40s-loop D L Q A 50s-loopC-term D L Q C L C V K T T S Q V R P R H N-term I V E L S T I L I A T L L C I K P L Y K K I I K K L L E S
Pick color:
 
 
 
 
 
 
 
 
 
 
 
 


Interactions for this Binding Partner

Download list in excel
Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 7 60 N-term LYS 14 D Anionic
Asp 7 60 N-term VAL 13 D Hydrophobic
Asp 7 60 N-term VAL 13 D VdWContact
Asp 7 60 N-term CYS 52 D VdWContact
Leu 8 61 N-term VAL 13 D Hydrophobic
Leu 8 61 N-term VAL 13 D VdWContact
Gln 9 62 N-term VAL 13 D Hydrophobic
Gln 9 62 N-term VAL 13 D VdWContact
Gln 9 62 N-term LEU 11 D HBDonor
Gln 9 62 N-term LEU 11 D VdWContact
Gln 9 62 N-term CYS 10 D VdWContact
Cys 10 63 CX GLN 9 D HBAcceptor
Cys 10 63 CX GLN 9 D VdWContact
Leu 11 66 CX LEU 11 D Hydrophobic
Leu 11 66 CX LEU 11 D VdWContact
Leu 11 66 CX LEU 8 D Hydrophobic
Leu 11 66 CX LEU 8 D VdWContact
Leu 11 66 CX GLN 9 D HBAcceptor
Leu 11 66 CX GLN 9 D VdWContact
Val 13 68 N-loop ASP 7 D HBDonor
Val 13 68 N-loop ASP 7 D VdWContact
Val 13 68 N-loop GLN 9 D Hydrophobic
Lys 14 69 N-loop ASP 7 D HBDonor
Lys 14 69 N-loop ASP 7 D VdWContact
Thr 25 84 B1 ASN 47 C HBDonor
Thr 25 84 B1 ASN 47 C VdWContact
Thr 25 84 B1 LYS 31 A Hydrophobic
Thr 25 84 B1 LYS 31 A HBAcceptor
Thr 25 84 B1 LYS 31 A VdWContact
Ser 26 85 B1 ILE 30 A VdWContact
Leu 27 86 B1 VAL 29 A HBAcceptor
Leu 27 86 B1 VAL 29 A HBDonor
Leu 27 86 B1 VAL 29 A VdWContact
Glu 28 87 B1 GLU 28 A Hydrophobic
Glu 28 87 B1 LEU 27 A VdWContact
Val 29 88 B1 LEU 67 A Hydrophobic
Val 29 88 B1 LEU 68 A Hydrophobic
Val 29 88 B1 LEU 68 A VdWContact
Val 29 88 B1 SER 26 A VdWContact
Val 29 88 B1 LEU 27 A HBAcceptor
Val 29 88 B1 LEU 27 A HBDonor
Val 29 88 B1 LEU 27 A VdWContact
Lys 31 90 30s-loop LYS 46 A VdWContact
Lys 31 90 30s-loop LEU 67 A Hydrophobic
Lys 31 90 30s-loop LEU 67 A VdWContact
Lys 31 90 30s-loop THR 25 A HBDonor
Lys 31 90 30s-loop THR 25 A VdWContact
Leu 41 101 B2 LEU 68 A Hydrophobic
Leu 41 101 B2 LEU 68 A VdWContact
Arg 49 114 40s-loop PRO 34 D Hydrophobic
Lys 50 115 B3 LEU 8 D Hydrophobic
Lys 50 115 B3 LEU 8 D VdWContact
Leu 55 120 50s-loop LEU 68 A Hydrophobic
Tyr 60 125 Helix LEU 68 A Hydrophobic
Tyr 60 125 Helix LEU 68 A VdWContact
Ile 64 129 Helix ILE 64 A Hydrophobic
Leu 67 132 Helix LYS 31 A Hydrophobic
Leu 67 132 Helix LYS 31 A VdWContact
Leu 67 132 Helix VAL 29 A Hydrophobic
Leu 68 133 Helix LEU 55 A Hydrophobic
Leu 68 133 Helix LEU 41 A Hydrophobic
Leu 68 133 Helix LEU 41 A VdWContact
Leu 68 133 Helix TYR 60 A Hydrophobic
Leu 68 133 Helix VAL 29 A Hydrophobic
Ser 70 135 Helix ALA 32 A HBAcceptor
Ser 70 135 Helix ALA 32 A VdWContact

Interaction pattern search
Search complexes with similar interaction patterns:

Specify the minimum similarity (0.00 no similarity, 1.00 identical)