Interactions for 5D65 — Binding Partner: Heparin


Structure details

  • Chemokine Chain: B
  • Partner Chain: F,G
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Chemokine diagram

T S S Q C S K P 30s-loop K R S R 40s-loop D P S E 50s-loopC-term L A A D T P T A C C F S Y T S R Q I P Q N N-term E F Y D A I F G V I F L T A C V Q E W V Q K Y V S D L E L S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Gln 19 cxb1.10 N-loop IDS 1 G HBDonor
Gln 19 cxb1.10 N-loop IDS 1 G VdWContact
Gln 22 cxb1.15 N-loop SGN 2 G VdWContact
Asn 23 cxb1.16 N-loop SGN 2 G VdWContact
Ala 26 B1.3 B1 SGN 2 F VdWContact
Lys 45 b2b3.2 40s-loop SGN 2 F HBDonor
Lys 45 b2b3.2 40s-loop SGN 2 F VdWContact
Lys 61 H.5 Helix IDS 1 G VdWContact
Lys 61 H.5 Helix SGN 2 G HBDonor
Lys 61 H.5 Helix SGN 2 G Cationic
Lys 61 H.5 Helix SGN 2 G VdWContact
Asp 65 H.9 Helix SGN 2 G VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)