Interactions for 5D65 — Binding Partner: CCL3


Structure details

  • Chemokine Chain: C
  • Partner Chain: A,B,D,E
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Chemokine diagram

T S S Q C S K P 30s-loop K R S R 40s-loop D P S E 50s-loopC-term L A A D T P T A C C F S Y T S R Q I P Q N N-term E F Y D A I F G V I F L T A C V Q E W V Q K Y V S D L E L S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Leu 3 NTc.Cm8 N-term PRO 8 A VdWContact
Ala 4 NTc.Cm7 N-term THR 9 A Hydrophobic
Ala 4 NTc.Cm7 N-term THR 9 A VdWContact
Asp 6 NTc.Cm5 N-term CYS 51 B HBAcceptor
Asp 6 NTc.Cm5 N-term CYS 51 B VdWContact
Asp 6 NTc.Cm5 N-term THR 16 B VdWContact
Thr 7 NTc.Cm4 N-term GLN 49 B Hydrophobic
Pro 8 NTc.Cm3 N-term LEU 3 A Hydrophobic
Pro 8 NTc.Cm3 N-term LEU 3 A VdWContact
Pro 8 NTc.Cm3 N-term CYS 51 B VdWContact
Pro 8 NTc.Cm3 N-term ALA 10 B Hydrophobic
Pro 8 NTc.Cm3 N-term LEU 3 D Hydrophobic
Pro 8 NTc.Cm3 N-term ILE 41 B Hydrophobic
Pro 8 NTc.Cm3 N-term ALA 4 A HBAcceptor
Pro 8 NTc.Cm3 N-term ALA 4 A VdWContact
Thr 9 NTc.Cm2 N-term CYS 11 B HBAcceptor
Thr 9 NTc.Cm2 N-term CYS 11 B HBDonor
Thr 9 NTc.Cm2 N-term CYS 11 B VdWContact
Thr 9 NTc.Cm2 N-term PHE 13 B Hydrophobic
Thr 9 NTc.Cm2 N-term PHE 13 B VdWContact
Ala 10 NTc.Cm1 N-term LEU 3 A Hydrophobic
Ala 10 NTc.Cm1 N-term PRO 8 B Hydrophobic
Ala 10 NTc.Cm1 N-term ALA 4 A VdWContact
Cys 11 CX.1 CX THR 9 B HBAcceptor
Cys 11 CX.1 CX THR 9 B HBDonor
Cys 11 CX.1 CX THR 9 B VdWContact
Phe 13 cxb1.1 N-loop THR 9 B Hydrophobic
Phe 13 cxb1.1 N-loop THR 9 B VdWContact
Phe 13 cxb1.1 N-loop GLN 34 B Hydrophobic
Phe 13 cxb1.1 N-loop GLN 34 B VdWContact
Ser 14 cxb1.2 N-loop ASP 6 B HBDonor
Ser 14 cxb1.2 N-loop ASP 6 B VdWContact
Tyr 15 cxb1.5 N-loop SER 33 D HBAcceptor
Tyr 15 cxb1.5 N-loop SER 33 D VdWContact
Thr 16 cxb1.6 N-loop ASP 6 B VdWContact
Ser 17 cxb1.7 N-loop SER 33 D VdWContact
Asn 23 cxb1.16 N-loop LEU 68 D Hydrophobic
Asn 23 cxb1.16 N-loop LEU 68 D VdWContact
Phe 24 B1.1 B1 LEU 68 D Hydrophobic
Phe 24 B1.1 B1 GLU 67 D Hydrophobic
Phe 24 B1.1 B1 VAL 63 D Hydrophobic
Phe 29 B1.6 B1 ALA 5 A Hydrophobic
Gln 34 b1b2.10 30s-loop PHE 13 B Hydrophobic
Gln 34 b1b2.10 30s-loop PHE 13 B VdWContact
Ser 36 b1b2.13 30s-loop CL 102 B VdWContact
Ile 41 B2.3 B2 PRO 8 B Hydrophobic
Ile 41 B2.3 B2 PRO 8 B VdWContact
Thr 44 B2.6 B2 GLU 67 D VdWContact
Lys 45 b2b3.2 40s-loop GLU 67 D HBDonor
Lys 45 b2b3.2 40s-loop GLU 67 D VdWContact
Arg 46 b2b3.4 40s-loop LEU 66 D HBDonor
Arg 46 b2b3.4 40s-loop LEU 66 D VdWContact
Arg 46 b2b3.4 40s-loop GLU 67 D Hydrophobic
Arg 46 b2b3.4 40s-loop GLU 67 D VdWContact
Arg 46 b2b3.4 40s-loop ASP 27 D HBDonor
Arg 46 b2b3.4 40s-loop ASP 27 D Cationic
Arg 46 b2b3.4 40s-loop TYR 28 D VdWContact
Arg 48 b2b3.12 40s-loop PHE 29 D VdWContact
Arg 48 b2b3.12 40s-loop ASP 27 D HBDonor
Arg 48 b2b3.12 40s-loop ASP 27 D Cationic
Arg 48 b2b3.12 40s-loop ASP 27 D VdWContact
Arg 48 b2b3.12 40s-loop TYR 28 D VdWContact
Gln 49 B3.1 B3 SER 2 A HBDonor
Gln 49 B3.1 B3 SER 2 A VdWContact
Gln 49 B3.1 B3 PRO 8 B Hydrophobic
Cys 51 B3.3 B3 ASP 6 B HBDonor
Cys 51 B3.3 B3 ASP 6 B VdWContact
Cys 51 B3.3 B3 PRO 8 B VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)