Interactions for 5D65 — Binding Partner: CCL3


Structure details

  • Chemokine Chain: D
  • Partner Chain: A,B,C,E
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Chemokine diagram

T S S Q C S K P 30s-loop K R S R 40s-loop D P S E 50s-loopC-term L A A D T P T A C C F S Y T S R Q I P Q N N-term E F Y D A I F G V I F L T A C V Q E W V Q K Y V S D L E L S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Leu 3 NTc.Cm8 N-term ALA 10 B Hydrophobic
Leu 3 NTc.Cm8 N-term ALA 10 B VdWContact
Leu 3 NTc.Cm8 N-term GLN 49 B VdWContact
Leu 3 NTc.Cm8 N-term PHE 29 B Hydrophobic
Leu 3 NTc.Cm8 N-term ILE 41 B Hydrophobic
Leu 3 NTc.Cm8 N-term PRO 8 C Hydrophobic
Ala 5 NTc.Cm6 N-term SER 32 B VdWContact
Ala 5 NTc.Cm6 N-term GLU 30 B VdWContact
Asp 6 NTc.Cm5 N-term THR 16 E VdWContact
Asp 6 NTc.Cm5 N-term SER 33 B HBAcceptor
Asp 6 NTc.Cm5 N-term SER 33 B VdWContact
Asp 6 NTc.Cm5 N-term CYS 51 E HBAcceptor
Asp 6 NTc.Cm5 N-term CYS 51 E VdWContact
Asp 6 NTc.Cm5 N-term SER 32 B HBAcceptor
Asp 6 NTc.Cm5 N-term SER 32 B VdWContact
Asp 6 NTc.Cm5 N-term VAL 50 E Hydrophobic
Thr 7 NTc.Cm4 N-term GLN 49 E Hydrophobic
Thr 7 NTc.Cm4 N-term GLN 49 E VdWContact
Pro 8 NTc.Cm3 N-term CYS 11 E VdWContact
Pro 8 NTc.Cm3 N-term ILE 41 E Hydrophobic
Pro 8 NTc.Cm3 N-term ILE 41 E VdWContact
Pro 8 NTc.Cm3 N-term ALA 10 E Hydrophobic
Pro 8 NTc.Cm3 N-term GLN 49 E Hydrophobic
Thr 9 NTc.Cm2 N-term CYS 11 E HBAcceptor
Thr 9 NTc.Cm2 N-term CYS 11 E HBDonor
Thr 9 NTc.Cm2 N-term CYS 11 E VdWContact
Thr 9 NTc.Cm2 N-term PHE 13 E Hydrophobic
Thr 9 NTc.Cm2 N-term PHE 13 E VdWContact
Ala 10 NTc.Cm1 N-term PRO 8 E Hydrophobic
Ala 10 NTc.Cm1 N-term PRO 8 E VdWContact
Ala 10 NTc.Cm1 N-term LEU 3 B Hydrophobic
Cys 11 CX.1 CX THR 9 E HBAcceptor
Cys 11 CX.1 CX THR 9 E HBDonor
Cys 11 CX.1 CX THR 9 E VdWContact
Phe 13 cxb1.1 N-loop THR 9 E Hydrophobic
Phe 13 cxb1.1 N-loop THR 9 E VdWContact
Phe 13 cxb1.1 N-loop CYS 11 E VdWContact
Phe 13 cxb1.1 N-loop GLN 34 E Hydrophobic
Phe 13 cxb1.1 N-loop GLN 34 E VdWContact
Ser 14 cxb1.2 N-loop ASP 6 E HBDonor
Ser 14 cxb1.2 N-loop ASP 6 E VdWContact
Thr 16 cxb1.6 N-loop ASP 6 E VdWContact
Asp 27 B1.4 B1 ARG 48 C HBAcceptor
Asp 27 B1.4 B1 ARG 48 C Anionic
Asp 27 B1.4 B1 ARG 48 C VdWContact
Asp 27 B1.4 B1 ARG 46 C HBAcceptor
Asp 27 B1.4 B1 ARG 46 C Anionic
Tyr 28 B1.5 B1 ARG 48 C VdWContact
Tyr 28 B1.5 B1 ARG 46 C VdWContact
Phe 29 B1.6 B1 LEU 3 B Hydrophobic
Phe 29 B1.6 B1 LEU 3 B VdWContact
Phe 29 B1.6 B1 ARG 48 C VdWContact
Glu 30 B1.7 B1 ALA 5 B VdWContact
Ser 32 b1b2.6 30s-loop ALA 5 B VdWContact
Ser 32 b1b2.6 30s-loop ASP 6 B HBDonor
Ser 32 b1b2.6 30s-loop ASP 6 B VdWContact
Ser 33 b1b2.9 30s-loop TYR 15 C HBDonor
Ser 33 b1b2.9 30s-loop TYR 15 C VdWContact
Ser 33 b1b2.9 30s-loop SER 17 C VdWContact
Ser 33 b1b2.9 30s-loop ASP 6 B HBDonor
Ser 33 b1b2.9 30s-loop ASP 6 B VdWContact
Gln 34 b1b2.10 30s-loop PHE 13 E Hydrophobic
Gln 34 b1b2.10 30s-loop PHE 13 E VdWContact
Ser 36 b1b2.13 30s-loop CL 103 E VdWContact
Ile 41 B2.3 B2 PRO 8 E Hydrophobic
Ile 41 B2.3 B2 PRO 8 E VdWContact
Ile 41 B2.3 B2 LEU 3 B Hydrophobic
Gln 49 B3.1 B3 LEU 3 B VdWContact
Gln 49 B3.1 B3 PRO 8 E Hydrophobic
Val 50 B3.2 B3 ASP 6 E Hydrophobic
Val 63 H.7 Helix PHE 24 C Hydrophobic
Leu 66 H.10 Helix ARG 46 C HBAcceptor
Leu 66 H.10 Helix ARG 46 C VdWContact
Glu 67 CT.1 C-term PHE 24 C Hydrophobic
Glu 67 CT.1 C-term ARG 46 C Hydrophobic
Glu 67 CT.1 C-term ARG 46 C VdWContact
Glu 67 CT.1 C-term LYS 45 C HBAcceptor
Glu 67 CT.1 C-term LYS 45 C VdWContact
Glu 67 CT.1 C-term THR 44 C VdWContact
Leu 68 CT.2 C-term PHE 24 C Hydrophobic
Leu 68 CT.2 C-term ASN 23 C Hydrophobic
Leu 68 CT.2 C-term ASN 23 C VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)