Interactions for 2L9H — Binding Partner: CCL5


Structure details

  • Chemokine Chain: A
  • Partner Chain: B
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Chemokine diagram

S G K C S N P A 30s-loop R K N R 40s-loop N P E K 50s-loopC-term P Y S S D T T P C C F A Y I A R P L P R A H N-term T Y F Y E K I V V F V T A C V Q K W V R E Y I N S L E M S
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Tyr 3 56 N-term ALA 13 B Hydrophobic
Tyr 3 56 N-term PHE 12 B Hydrophobic
Ser 4 57 N-term ALA 13 B VdWContact
Ser 5 58 N-term CYS 50 B HBAcceptor
Ser 5 58 N-term CYS 50 B VdWContact
Asp 6 59 N-term ARG 47 B HBAcceptor
Asp 6 59 N-term ARG 47 B Anionic
Asp 6 59 N-term ARG 47 B VdWContact
Asp 6 59 N-term GLN 48 B VdWContact
Thr 7 60 N-term VAL 40 B Hydrophobic
Thr 7 60 N-term GLN 48 B Hydrophobic
Thr 7 60 N-term GLN 48 B HBDonor
Thr 7 60 N-term GLN 48 B VdWContact
Thr 7 60 N-term PRO 9 B Hydrophobic
Thr 8 61 N-term CYS 10 B HBAcceptor
Thr 8 61 N-term CYS 10 B HBDonor
Thr 8 61 N-term CYS 10 B VdWContact
Thr 8 61 N-term PHE 12 B Hydrophobic
Pro 9 62 N-term THR 7 B Hydrophobic
Cys 10 63 CX CYS 10 B VdWContact
Cys 10 63 CX PHE 12 B VdWContact
Cys 10 63 CX THR 8 B HBAcceptor
Cys 10 63 CX THR 8 B HBDonor
Cys 10 63 CX THR 8 B VdWContact
Phe 12 68 N-loop LYS 33 B Hydrophobic
Phe 12 68 N-loop LYS 33 B VdWContact
Phe 12 68 N-loop THR 8 B Hydrophobic
Phe 12 68 N-loop THR 8 B VdWContact
Lys 33 94 30s-loop PHE 12 B Hydrophobic
Lys 33 94 30s-loop PHE 12 B VdWContact
Val 40 102 B2 THR 7 B Hydrophobic
Arg 47 114 40s-loop SER 4 B VdWContact
Gln 48 115 B3 ASP 6 B HBAcceptor
Gln 48 115 B3 ASP 6 B VdWContact
Gln 48 115 B3 SER 4 B HBDonor
Gln 48 115 B3 SER 4 B VdWContact
Gln 48 115 B3 SER 5 B HBAcceptor
Gln 48 115 B3 SER 5 B VdWContact
Cys 50 117 B3 ASP 6 B Hydrophobic
Cys 50 117 B3 ASP 6 B VdWContact

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