Interactions for 1F9S — Binding Partner: CXCL4


Structure details

  • Chemokine Chain: C
  • Partner Chain: A,B,D
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Chemokine diagram

I K A G P H C P T A 30s-loop K N G S 40s-loop D L Q A 50s-loopC-term Q C L C V K T T S Q V R P R N-term V E L S T I H Q L I A T L L C I K P L Y K K I I K K L L E S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Gln 209 NTc.Cm1 N-term LYS 114 B Hydrophobic
Gln 209 NTc.Cm1 N-term CYS 152 B VdWContact
Gln 209 NTc.Cm1 N-term THR 116 B VdWContact
Gln 209 NTc.Cm1 N-term ILE 151 B VdWContact
Leu 211 CX.4 CX LYS 150 B Hydrophobic
Leu 211 CX.4 CX LEU 111 B Hydrophobic
Leu 211 CX.4 CX LEU 111 B VdWContact
Lys 214 cxb1.2 N-loop VAL 113 B VdWContact
Thr 225 B1.3 B1 LYS 331 D HBAcceptor
Thr 225 B1.3 B1 LYS 331 D VdWContact
Ser 226 B1.4 B1 VAL 329 D VdWContact
Leu 227 B1.5 B1 VAL 329 D Hydrophobic
Leu 227 B1.5 B1 VAL 329 D HBAcceptor
Leu 227 B1.5 B1 VAL 329 D HBDonor
Leu 227 B1.5 B1 VAL 329 D VdWContact
Glu 228 B1.6 B1 SER 326 D HBAcceptor
Glu 228 B1.6 B1 SER 326 D VdWContact
Glu 228 B1.6 B1 LYS 150 B HBAcceptor
Glu 228 B1.6 B1 LYS 150 B Anionic
Glu 228 B1.6 B1 LYS 150 B VdWContact
Glu 228 B1.6 B1 GLU 328 D Hydrophobic
Val 229 B1.7 B1 LEU 367 D Hydrophobic
Val 229 B1.7 B1 SER 326 D VdWContact
Val 229 B1.7 B1 ILE 364 D Hydrophobic
Val 229 B1.7 B1 LEU 368 D Hydrophobic
Val 229 B1.7 B1 LEU 368 D VdWContact
Val 229 B1.7 B1 LEU 327 D Hydrophobic
Val 229 B1.7 B1 LEU 327 D HBAcceptor
Val 229 B1.7 B1 LEU 327 D HBDonor
Val 229 B1.7 B1 LEU 327 D VdWContact
Ile 230 b1b2.4 30s-loop LYS 150 B Hydrophobic
Ile 230 b1b2.4 30s-loop LYS 150 B VdWContact
Lys 231 b1b2.6 30s-loop LEU 367 D Hydrophobic
Lys 231 b1b2.6 30s-loop LEU 367 D VdWContact
Lys 231 b1b2.6 30s-loop LYS 366 D HBDonor
Lys 231 b1b2.6 30s-loop THR 325 D HBDonor
Lys 231 b1b2.6 30s-loop THR 325 D VdWContact
Ala 232 b1b2.7 30s-loop SER 370 D VdWContact
His 235 b1b2.10 30s-loop ILE 151 B Hydrophobic
His 235 b1b2.10 30s-loop ILE 151 B VdWContact
His 235 b1b2.10 30s-loop LEU 145 B Hydrophobic
Ala 239 b1b2.16 30s-loop SER 370 D VdWContact
Ala 239 b1b2.16 30s-loop LEU 368 D Hydrophobic
Leu 241 B2.2 B2 LEU 368 D Hydrophobic
Leu 241 B2.2 B2 LEU 368 D VdWContact
Ile 242 B2.3 B2 LYS 150 B Hydrophobic
Ile 242 B2.3 B2 LEU 111 B Hydrophobic
Lys 246 b2b3.2 40s-loop GLY 48 A HBDonor
Lys 246 b2b3.2 40s-loop GLY 48 A VdWContact
Asn 247 b2b3.4 40s-loop THR 25 A HBAcceptor
Asn 247 b2b3.4 40s-loop THR 25 A VdWContact
Lys 250 B3.1 B3 LEU 111 B Hydrophobic
Lys 250 B3.1 B3 LEU 111 B VdWContact
Lys 250 B3.1 B3 GLU 128 B HBDonor
Lys 250 B3.1 B3 GLU 128 B Cationic
Lys 250 B3.1 B3 GLU 128 B VdWContact
Ile 251 B3.2 B3 LEU 111 B VdWContact
Cys 252 B3.3 B3 LEU 111 B Hydrophobic
Cys 252 B3.3 B3 LEU 111 B VdWContact
Leu 255 b3h.2 50s-loop LEU 368 D Hydrophobic
Leu 255 b3h.2 50s-loop LEU 368 D VdWContact
Tyr 260 H.3 Helix LEU 368 D Hydrophobic
Ile 264 H.7 Helix ILE 364 D Hydrophobic
Ile 264 H.7 Helix ILE 364 D VdWContact
Leu 267 H.10 Helix LYS 331 D Hydrophobic
Leu 267 H.10 Helix LYS 331 D VdWContact
Leu 267 H.10 Helix VAL 329 D Hydrophobic
Leu 268 CT.1 C-term LEU 341 D Hydrophobic
Leu 268 CT.1 C-term LEU 341 D VdWContact
Leu 268 CT.1 C-term VAL 329 D Hydrophobic
Leu 268 CT.1 C-term TYR 360 D Hydrophobic
Leu 268 CT.1 C-term TYR 360 D VdWContact
Leu 268 CT.1 C-term ALA 339 D Hydrophobic
Ser 270 CT.3 C-term ALA 332 D HBAcceptor
Ser 270 CT.3 C-term ALA 332 D VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)