Interactions

6AEZ | CCL5_HUMAN — CCL5

Residue contacts: 39
SUMMARY
Protein
CCL5_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P13501 View on UniProt
PDB ID
6AEZ View on PDB
Method
X-ray
Resolution
1.63 Å
Date
Aug. 7, 2019
Reference
10.1016/J.JMB.2019.12.049 Open DOI
State
Oligomer
Chain information
Chemokine chain
C
Partner chain
B
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Tyr 4 NTc.Cm7 N-term ALA 14 B Hydrophobic
Tyr 4 NTc.Cm7 N-term PHE 13 B Hydrophobic
Ser 5 NTc.Cm6 N-term ALA 14 B VdWContact
Ser 6 NTc.Cm5 N-term CYS 51 B HBAcceptor
Ser 6 NTc.Cm5 N-term CYS 51 B VdWContact
Thr 8 NTc.Cm3 N-term VAL 41 B Hydrophobic
Thr 8 NTc.Cm3 N-term PRO 10 B Hydrophobic
Thr 8 NTc.Cm3 N-term GLN 49 B Hydrophobic
Thr 8 NTc.Cm3 N-term GLN 49 B HBDonor
Thr 8 NTc.Cm3 N-term GLN 49 B VdWContact
Thr 9 NTc.Cm2 N-term PHE 13 B Hydrophobic
Thr 9 NTc.Cm2 N-term PHE 13 B VdWContact
Thr 9 NTc.Cm2 N-term CYS 11 B HBAcceptor
Thr 9 NTc.Cm2 N-term CYS 11 B HBDonor
Thr 9 NTc.Cm2 N-term CYS 11 B VdWContact
Pro 10 NTc.Cm1 N-term THR 8 B Hydrophobic
Cys 11 CX.1 CX THR 9 B HBAcceptor
Cys 11 CX.1 CX THR 9 B HBDonor
Cys 11 CX.1 CX THR 9 B VdWContact
Phe 13 cxb1.1 N-loop LYS 34 B Hydrophobic
Phe 13 cxb1.1 N-loop THR 9 B Hydrophobic
Phe 13 cxb1.1 N-loop THR 9 B VdWContact
Phe 13 cxb1.1 N-loop PRO 3 B Hydrophobic
Phe 13 cxb1.1 N-loop PRO 3 B VdWContact
Ala 14 cxb1.2 N-loop SER 6 B VdWContact
Ala 14 cxb1.2 N-loop SER 5 B VdWContact
Ile 16 cxb1.6 N-loop SER 6 B HBAcceptor
Ile 16 cxb1.6 N-loop SER 6 B VdWContact
Lys 34 b1b2.10 30s-loop PHE 13 B Hydrophobic
Val 41 B2.3 B2 THR 8 B Hydrophobic
Arg 48 b2b3.12 40s-loop ASP 7 B HBDonor
Arg 48 b2b3.12 40s-loop ASP 7 B Cationic
Arg 48 b2b3.12 40s-loop ASP 7 B VdWContact
Gln 49 B3.1 B3 THR 8 B Hydrophobic
Gln 49 B3.1 B3 THR 8 B HBAcceptor
Gln 49 B3.1 B3 THR 8 B VdWContact
Gln 49 B3.1 B3 ASP 7 B VdWContact
Cys 51 B3.3 B3 SER 6 B HBDonor
Cys 51 B3.3 B3 SER 6 B VdWContact
CHEMOKINE DIAGRAM
T S G K C S N P 30s-loop R K N R 40s-loop N P E K 50s-loopC-term P Y S S D T T P C C F A Y I A R P L P R A N-term Y F Y E K I H A V V F V T A C V Q K W V R E Y I N S L S M S
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical