Interactions for 5L2U — Binding Partner: CCL5


Structure details

  • Chemokine Chain: B
  • Partner Chain: D
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Chemokine diagram

T S G K C S N P 30s-loop R K N R 40s-loop N P E K 50s-loopC-term S S D T T P C C F A Y I A R P L P R A N-term Y F Y E K I H A V V F V T A C V Q K W V R E Y I N S L E M S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Glu 26 B1.4 B1 ARG 47 D Anionic
Glu 26 B1.4 B1 ARG 47 D VdWContact
Tyr 27 B1.5 B1 ARG 47 D Hydrophobic
Tyr 27 B1.5 B1 ARG 47 D HBAcceptor
Tyr 27 B1.5 B1 ARG 47 D VdWContact
Tyr 29 B1.7 B1 VAL 49 D Hydrophobic
Tyr 29 B1.7 B1 ILE 15 D Hydrophobic
Tyr 29 B1.7 B1 LEU 19 D Hydrophobic
Lys 33 b1b2.10 30s-loop PHE 12 D Hydrophobic
Lys 33 b1b2.10 30s-loop ALA 13 D Hydrophobic
Lys 33 b1b2.10 30s-loop ALA 13 D VdWContact
Glu 54 b3h.3 50s-loop ARG 17 D VdWContact
Arg 59 H.4 Helix ARG 17 D VdWContact
Ile 62 H.7 Helix HIS 23 D Hydrophobic
Asn 63 H.8 Helix HIS 23 D Hydrophobic
Asn 63 H.8 Helix HIS 23 D HBAcceptor
Asn 63 H.8 Helix HIS 23 D VdWContact
Leu 65 H.10 Helix LYS 45 D VdWContact
Glu 66 CT.1 C-term ARG 47 D Anionic
Glu 66 CT.1 C-term ARG 47 D VdWContact
Glu 66 CT.1 C-term THR 43 D HBAcceptor
Glu 66 CT.1 C-term THR 43 D VdWContact
Glu 66 CT.1 C-term HIS 23 D Hydrophobic
Glu 66 CT.1 C-term LYS 45 D HBAcceptor
Glu 66 CT.1 C-term LYS 45 D VdWContact
Glu 66 CT.1 C-term ARG 44 D VdWContact
Met 67 CT.2 C-term HIS 23 D Hydrophobic
Met 67 CT.2 C-term ALA 22 D Hydrophobic
Met 67 CT.2 C-term ALA 22 D VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)