Interactions

6WWZ | CCL20_HUMAN — CCR6

Residue contacts: 29
SUMMARY
Protein
CCL20_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P78556 View on UniProt
PDB ID
6WWZ View on PDB
Method
Cryo-em
Resolution
3.34 Å
Date
June 24, 2020
Reference
10.1038/S41467-020-16820-6 Open DOI
State
Monomer
Chain information
Chemokine chain
C
Partner chain
R
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Ala 1 NTc.Cm5 N-term GLU 198 R VdWContact
Asn 3 NTc.Cm3 N-term VAL 41 R Hydrophobic
Asn 3 NTc.Cm3 N-term LEU 38 R Hydrophobic
Asn 3 NTc.Cm3 N-term ARG 42 R Hydrophobic
Asn 3 NTc.Cm3 N-term ARG 42 R HBAcceptor
Phe 4 NTc.Cm2 N-term THR 191 R Hydrophobic
Phe 4 NTc.Cm2 N-term GLN 192 R Hydrophobic
Phe 4 NTc.Cm2 N-term VAL 196 R Hydrophobic
Asp 5 NTc.Cm1 N-term LEU 35 R Hydrophobic
Asp 5 NTc.Cm1 N-term LEU 35 R VdWContact
Asp 5 NTc.Cm1 N-term GLN 192 R VdWContact
Asp 5 NTc.Cm1 N-term CYS 36 R VdWContact
Leu 8 cxb1.1 N-loop CYS 288 R Hydrophobic
Leu 8 cxb1.1 N-loop ARG 286 R Hydrophobic
Tyr 10 cxb1.5 N-loop MET 284 R Hydrophobic
Tyr 10 cxb1.5 N-loop MET 284 R VdWContact
Phe 19 B1.1 B1 TYR 27 R Hydrophobic
Asn 29 b1b2.8 30s-loop TYR 201 R VdWContact
Glu 30 b1b2.9 30s-loop LYS 200 R Hydrophobic
Glu 30 b1b2.9 30s-loop LYS 200 R HBAcceptor
Glu 30 b1b2.9 30s-loop LYS 200 R Anionic
Glu 30 b1b2.9 30s-loop LYS 200 R VdWContact
Glu 30 b1b2.9 30s-loop TYR 189 R Hydrophobic
Glu 30 b1b2.9 30s-loop TYR 189 R VdWContact
Cys 32 b1b2.12 30s-loop LYS 211 R VdWContact
Asp 33 b1b2.13 30s-loop ARG 286 R Anionic
Asp 33 b1b2.13 30s-loop ARG 286 R VdWContact
Ser 46 B3.1 B3 LEU 35 R HBAcceptor
Ser 46 B3.1 B3 LEU 35 R VdWContact
CHEMOKINE DIAGRAM
Q L A N E G C D I N 30s-loop K K K L 40s-loop N P K Q 50s-loopC-term A S N F D C C L G Y T D R I L H P K N-term R T F G V I F A I I F H T A C V S T W V K Y I V R L L S K K
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical