Interactions for 5LTL — Binding Partner: CCL16


Structure details

  • Chemokine Chain: A
  • Partner Chain: B
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Chemokine diagram

A L N C H L P 30s-loop K R N R 40s-loop N P N D 50s-loopC-term V N T P S T C C L K Y Y E K V L P R R N-term K R Y G V V L A I I F V T T C V E D W V Q E Y I K D P N L P L L P T

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asn 9 NTc.Cm5 N-term CYS 53 B HBAcceptor
Asn 9 NTc.Cm5 N-term CYS 53 B VdWContact
Asn 9 NTc.Cm5 N-term TYR 19 B Hydrophobic
Asn 9 NTc.Cm5 N-term TYR 19 B VdWContact
Pro 11 NTc.Cm3 N-term THR 13 B Hydrophobic
Pro 11 NTc.Cm3 N-term ILE 43 B Hydrophobic
Pro 11 NTc.Cm3 N-term GLU 51 B Hydrophobic
Ser 12 NTc.Cm2 N-term THR 13 B VdWContact
Ser 12 NTc.Cm2 N-term CYS 14 B HBAcceptor
Ser 12 NTc.Cm2 N-term CYS 14 B HBDonor
Ser 12 NTc.Cm2 N-term CYS 14 B VdWContact
Thr 13 NTc.Cm1 N-term SER 12 B VdWContact
Thr 13 NTc.Cm1 N-term PRO 11 B Hydrophobic
Thr 13 NTc.Cm1 N-term PRO 11 B VdWContact
Cys 14 CX.1 CX SER 12 B HBAcceptor
Cys 14 CX.1 CX SER 12 B HBDonor
Cys 14 CX.1 CX SER 12 B VdWContact
Cys 14 CX.1 CX CYS 14 B Hydrophobic
Lys 17 cxb1.2 N-loop ASN 9 B HBDonor
Lys 17 cxb1.2 N-loop ASN 9 B VdWContact
Lys 17 cxb1.2 N-loop VAL 8 B VdWContact
Tyr 19 cxb1.6 N-loop ASN 9 B Hydrophobic
Tyr 19 cxb1.6 N-loop ASN 9 B VdWContact
His 38 b1b2.13 30s-loop HIS 38 B Hydrophobic
His 38 b1b2.13 30s-loop HIS 38 B PiStacking
Ile 43 B2.3 B2 PRO 11 B Hydrophobic
Glu 51 B3.1 B3 THR 10 B VdWContact
Glu 51 B3.1 B3 PRO 11 B Hydrophobic
Cys 53 B3.3 B3 ASN 9 B HBDonor
Cys 53 B3.3 B3 ASN 9 B VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)