Interactions for 5OB5 — Binding Partner: Unknown fAb


Structure details

  • Chemokine Chain: A
  • Partner Chain: H,L
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Chemokine diagram

K S P G P H C A Q T 30s-loop K N G Q 40s-loop N P A S 50s-loopC-term E L R C Q C L Q T L Q G I H L K N-term V K V S Q I N E V I A T L L C A K P M V K K I I E K M L K

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Leu 7 NTc.Cm2 N-term PHE 59 H Hydrophobic
Leu 7 NTc.Cm2 N-term TYR 57 H Hydrophobic
Leu 7 NTc.Cm2 N-term TRP 33 H Hydrophobic
Arg 8 NTc.Cm1 N-term THR 104 H Hydrophobic
Arg 8 NTc.Cm1 N-term GLY 92 L HBDonor
Arg 8 NTc.Cm1 N-term GLY 92 L VdWContact
Arg 8 NTc.Cm1 N-term ASP 102 H Hydrophobic
Arg 8 NTc.Cm1 N-term TYR 32 L Hydrophobic
Arg 8 NTc.Cm1 N-term GLU 30 L Cationic
Cys 9 CX.1 CX TYR 50 L Hydrophobic
Cys 9 CX.1 CX TYR 32 L HBAcceptor
Cys 9 CX.1 CX TYR 32 L VdWContact
Cys 9 CX.1 CX ASP 102 H HBDonor
Cys 9 CX.1 CX ASP 102 H VdWContact
Leu 12 cxb1.1 N-loop TYR 50 L Hydrophobic
Leu 12 cxb1.1 N-loop TYR 50 L VdWContact
Leu 12 cxb1.1 N-loop ARG 53 L HBAcceptor
Leu 12 cxb1.1 N-loop ARG 53 L VdWContact
Leu 12 cxb1.1 N-loop TYR 32 L Hydrophobic
Gln 13 cxb1.2 N-loop ARG 53 L VdWContact
Pro 33 b1b2.9 30s-loop TRP 33 H Hydrophobic
Pro 33 b1b2.9 30s-loop TRP 33 H HBAcceptor
Pro 33 b1b2.9 30s-loop TRP 33 H VdWContact
Pro 33 b1b2.9 30s-loop TYR 57 H Hydrophobic
Pro 33 b1b2.9 30s-loop TYR 52 H Hydrophobic
Pro 33 b1b2.9 30s-loop TYR 52 H VdWContact
Cys 35 b1b2.12 30s-loop TYR 101 H VdWContact
Ala 36 b1b2.13 30s-loop TYR 32 H Hydrophobic
Ala 36 b1b2.13 30s-loop TYR 101 H HBDonor
Ala 36 b1b2.13 30s-loop TYR 101 H VdWContact
Gln 37 b1b2.14 30s-loop TYR 101 H Hydrophobic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)