Interactions for 6AEZ — Binding Partner: CCL5
Structure details
- PDB ID: 6AEZ open_in_new
- Protein: CCL5_HUMAN
- Organism: Homo sapiens
- UniProt ID: P13501 open_in_new
- Method: X-ray
- Resolution: 1.63 Å
- Date: Aug. 7, 2019
- Reference: 10.1016/J.JMB.2019.12.049 open_in_new
- State: Oligomer
- Chemokine Chain: C
- Partner Chain: B
Chemokine diagram
Interactions for this Binding Partner
Download list as CSV
| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Tyr 4 | NTc.Cm7 | N-term | ALA 14 | B | Hydrophobic |
| Tyr 4 | NTc.Cm7 | N-term | PHE 13 | B | Hydrophobic |
| Ser 5 | NTc.Cm6 | N-term | ALA 14 | B | VdWContact |
| Ser 6 | NTc.Cm5 | N-term | CYS 51 | B | HBAcceptor |
| Ser 6 | NTc.Cm5 | N-term | CYS 51 | B | VdWContact |
| Thr 8 | NTc.Cm3 | N-term | VAL 41 | B | Hydrophobic |
| Thr 8 | NTc.Cm3 | N-term | PRO 10 | B | Hydrophobic |
| Thr 8 | NTc.Cm3 | N-term | GLN 49 | B | Hydrophobic |
| Thr 8 | NTc.Cm3 | N-term | GLN 49 | B | HBDonor |
| Thr 8 | NTc.Cm3 | N-term | GLN 49 | B | VdWContact |
| Thr 9 | NTc.Cm2 | N-term | PHE 13 | B | Hydrophobic |
| Thr 9 | NTc.Cm2 | N-term | PHE 13 | B | VdWContact |
| Thr 9 | NTc.Cm2 | N-term | CYS 11 | B | HBAcceptor |
| Thr 9 | NTc.Cm2 | N-term | CYS 11 | B | HBDonor |
| Thr 9 | NTc.Cm2 | N-term | CYS 11 | B | VdWContact |
| Pro 10 | NTc.Cm1 | N-term | THR 8 | B | Hydrophobic |
| Cys 11 | CX.1 | CX | THR 9 | B | HBAcceptor |
| Cys 11 | CX.1 | CX | THR 9 | B | HBDonor |
| Cys 11 | CX.1 | CX | THR 9 | B | VdWContact |
| Phe 13 | cxb1.1 | N-loop | LYS 34 | B | Hydrophobic |
| Phe 13 | cxb1.1 | N-loop | THR 9 | B | Hydrophobic |
| Phe 13 | cxb1.1 | N-loop | THR 9 | B | VdWContact |
| Phe 13 | cxb1.1 | N-loop | PRO 3 | B | Hydrophobic |
| Phe 13 | cxb1.1 | N-loop | PRO 3 | B | VdWContact |
| Ala 14 | cxb1.2 | N-loop | SER 6 | B | VdWContact |
| Ala 14 | cxb1.2 | N-loop | SER 5 | B | VdWContact |
| Ile 16 | cxb1.6 | N-loop | SER 6 | B | HBAcceptor |
| Ile 16 | cxb1.6 | N-loop | SER 6 | B | VdWContact |
| Lys 34 | b1b2.10 | 30s-loop | PHE 13 | B | Hydrophobic |
| Val 41 | B2.3 | B2 | THR 8 | B | Hydrophobic |
| Arg 48 | b2b3.12 | 40s-loop | ASP 7 | B | HBDonor |
| Arg 48 | b2b3.12 | 40s-loop | ASP 7 | B | Cationic |
| Arg 48 | b2b3.12 | 40s-loop | ASP 7 | B | VdWContact |
| Gln 49 | B3.1 | B3 | THR 8 | B | Hydrophobic |
| Gln 49 | B3.1 | B3 | THR 8 | B | HBAcceptor |
| Gln 49 | B3.1 | B3 | THR 8 | B | VdWContact |
| Gln 49 | B3.1 | B3 | ASP 7 | B | VdWContact |
| Cys 51 | B3.3 | B3 | SER 6 | B | HBDonor |
| Cys 51 | B3.3 | B3 | SER 6 | B | VdWContact |
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