Interactions for 6FGP — Binding Partner: CCR5 N-terminal peptide


Structure details

  • Chemokine Chain: B
  • Partner Chain: A
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Chemokine diagram

T S G K C S N P 30s-loop R K N R 40s-loop N P E K 50s-loopC-term S P Y S S D T T S C C F A Y I A R P L P R A N-term Y F Y E K I H A V V F V T A C V Q K W V R E Y I N S L S M S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Phe 12 cxb1.1 N-loop GLN 21 A HBAcceptor
Phe 12 cxb1.1 N-loop GLN 21 A VdWContact
Ala 13 cxb1.2 N-loop GLN 21 A VdWContact
Tyr 14 cxb1.5 N-loop SER 17 A VdWContact
Tyr 14 cxb1.5 N-loop GLN 21 A HBDonor
Ile 15 cxb1.6 N-loop TYS 14 A Hydrophobic
Ile 15 cxb1.6 N-loop TYS 14 A VdWContact
Ile 15 cxb1.6 N-loop TYR 15 A Hydrophobic
Ile 15 cxb1.6 N-loop TYR 15 A VdWContact
Ala 16 cxb1.7 N-loop TYS 14 A HBDonor
Ala 16 cxb1.7 N-loop TYS 14 A VdWContact
Arg 17 cxb1.8 N-loop TYS 14 A Hydrophobic
Arg 17 cxb1.8 N-loop TYS 14 A HBDonor
Arg 17 cxb1.8 N-loop TYS 14 A Cationic
Arg 17 cxb1.8 N-loop TYS 14 A VdWContact
Leu 19 cxb1.11 N-loop TYS 14 A Hydrophobic
Leu 19 cxb1.11 N-loop TYS 14 A VdWContact
Leu 19 cxb1.11 N-loop TYR 15 A Hydrophobic
Leu 19 cxb1.11 N-loop TYS 10 A Hydrophobic
Lys 45 b2b3.4 40s-loop TYS 10 A HBDonor
Lys 45 b2b3.4 40s-loop TYS 10 A Cationic
Lys 45 b2b3.4 40s-loop TYS 10 A VdWContact
Arg 47 b2b3.12 40s-loop TYR 15 A Hydrophobic
Arg 47 b2b3.12 40s-loop TYR 15 A VdWContact
Arg 47 b2b3.12 40s-loop ASP 11 A HBDonor
Arg 47 b2b3.12 40s-loop ASP 11 A Cationic
Arg 47 b2b3.12 40s-loop ASP 11 A VdWContact
Arg 47 b2b3.12 40s-loop TYS 10 A VdWContact
Gln 48 B3.1 B3 TYR 15 A VdWContact
Val 49 B3.2 B3 TYR 15 A Hydrophobic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)