Interactions

7T1E | CCL20_HUMAN — CCL20

Residue contacts: 65
SUMMARY
Protein
CCL20_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P78556 View on UniProt
PDB ID
7T1E View on PDB
Method
X-ray
Resolution
1.46 Å
Date
Dec. 14, 2022
Reference
-
State
Dimer
Chain information
Chemokine chain
D
Partner chain
C
3D VIEW
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Ser 2 NTc.Cm4 N-term LYS 44 C HBAcceptor
Ser 2 NTc.Cm4 N-term LYS 44 C VdWContact
Asn 3 NTc.Cm3 N-term LYS 44 C HBAcceptor
Asn 3 NTc.Cm3 N-term LYS 44 C VdWContact
Asp 5 NTc.Cm1 N-term LYS 44 C Anionic
Val 21 B1.3 B1 ARG 25 C HBAcceptor
Val 21 B1.3 B1 ARG 25 C VdWContact
Val 21 B1.3 B1 THR 24 C Hydrophobic
Val 21 B1.3 B1 THR 24 C VdWContact
Gly 22 B1.4 B1 PHE 23 C VdWContact
Phe 23 B1.5 B1 LEU 63 C Hydrophobic
Phe 23 B1.5 B1 LEU 63 C VdWContact
Phe 23 B1.5 B1 VAL 67 C Hydrophobic
Phe 23 B1.5 B1 PHE 23 C Hydrophobic
Phe 23 B1.5 B1 PHE 23 C HBAcceptor
Phe 23 B1.5 B1 PHE 23 C HBDonor
Phe 23 B1.5 B1 PHE 23 C VdWContact
Phe 23 B1.5 B1 GLY 22 C VdWContact
Thr 24 B1.6 B1 VAL 21 C Hydrophobic
Thr 24 B1.6 B1 VAL 21 C VdWContact
Arg 25 B1.7 B1 VAL 21 C HBDonor
Arg 25 B1.7 B1 VAL 21 C VdWContact
Leu 27 b1b2.6 30s-loop MET 70 C Hydrophobic
Glu 30 b1b2.9 30s-loop LYS 42 C Anionic
Asn 35 b1b2.16 30s-loop MET 70 C Hydrophobic
Ile 37 B2.2 B2 VAL 67 C Hydrophobic
Ile 37 B2.2 B2 MET 70 C Hydrophobic
His 40 B2.5 B2 HIS 40 C Hydrophobic
Lys 42 b2b3.2 40s-loop GLU 30 C Cationic
Pro 51 b3h.2 50s-loop MET 70 C Hydrophobic
Lys 52 b3h.3 50s-loop MET 70 C HBDonor
Lys 52 b3h.3 50s-loop MET 70 C Cationic
Lys 52 b3h.3 50s-loop MET 70 C VdWContact
Lys 57 H.4 Helix MET 70 C HBDonor
Lys 57 H.4 Helix MET 70 C Cationic
Lys 57 H.4 Helix MET 70 C VdWContact
Lys 57 H.4 Helix LYS 68 C VdWContact
Lys 57 H.4 Helix VAL 67 C HBDonor
Lys 57 H.4 Helix VAL 67 C VdWContact
Val 60 H.7 Helix VAL 67 C Hydrophobic
Val 60 H.7 Helix VAL 67 C VdWContact
Arg 61 H.8 Helix SER 64 C VdWContact
Leu 63 H.10 Helix PHE 23 C Hydrophobic
Ser 64 CT.1 C-term SER 64 C VdWContact
Lys 66 CT.3 C-term LEU 27 C Hydrophobic
Lys 66 CT.3 C-term ARG 25 C Hydrophobic
Lys 66 CT.3 C-term ARG 25 C VdWContact
Val 67 CT.4 C-term LYS 57 C VdWContact
Val 67 CT.4 C-term PRO 51 C Hydrophobic
Val 67 CT.4 C-term VAL 60 C Hydrophobic
Val 67 CT.4 C-term VAL 60 C VdWContact
Val 67 CT.4 C-term ILE 37 C Hydrophobic
Val 67 CT.4 C-term ILE 37 C VdWContact
Val 67 CT.4 C-term PHE 23 C Hydrophobic
Lys 68 CT.5 C-term LYS 57 C HBAcceptor
Lys 68 CT.5 C-term LYS 57 C VdWContact
Met 70 CT.7 C-term LEU 27 C Hydrophobic
Met 70 CT.7 C-term PRO 51 C Hydrophobic
Met 70 CT.7 C-term LYS 52 C HBAcceptor
Met 70 CT.7 C-term LYS 52 C Anionic
Met 70 CT.7 C-term LYS 52 C VdWContact
Met 70 CT.7 C-term ASN 35 C Hydrophobic
Met 70 CT.7 C-term ASN 35 C HBAcceptor
Met 70 CT.7 C-term ASN 35 C VdWContact
Met 70 CT.7 C-term ILE 37 C Hydrophobic
CHEMOKINE DIAGRAM
Q L A N E G C D I N 30s-loop K K K L 40s-loop N P K Q 50s-loopC-term A S N F D C C L G Y T D R I L H P K N-term R T F G V I F A I I F H T A C V S T W V K Y I V R L L S K K V K N M
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical