Interactions

8IC0 | CXCL8_HUMAN — CXCR1

Residue contacts: 42
SUMMARY
Protein
CXCL8_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P10145 View on UniProt
PDB ID
8IC0 View on PDB
Method
Cryo-em
Resolution
3.41 Å
Date
July 19, 2023
Reference
10.1038/S41467-023-39799-2 Open DOI
State
Monomer
Chain information
Chemokine chain
F
Partner chain
A
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Ser 1 NTc.Cm6 N-term SER 184 A VdWContact
Ala 2 NTc.Cm5 N-term VAL 186 A VdWContact
Lys 3 NTc.Cm4 N-term GLU 291 A Cationic
Glu 4 NTc.Cm3 N-term ARG 199 A Anionic
Glu 4 NTc.Cm3 N-term LEU 287 A Hydrophobic
Glu 4 NTc.Cm3 N-term ARG 269 A HBAcceptor
Glu 4 NTc.Cm3 N-term ARG 269 A Anionic
Glu 4 NTc.Cm3 N-term ARG 269 A VdWContact
Glu 4 NTc.Cm3 N-term ARG 203 A HBAcceptor
Glu 4 NTc.Cm3 N-term ARG 203 A Anionic
Leu 5 NTc.Cm2 N-term TYR 188 A Hydrophobic
Arg 6 NTc.Cm1 N-term ASP 265 A HBDonor
Arg 6 NTc.Cm1 N-term ASP 265 A Cationic
Arg 6 NTc.Cm1 N-term ASP 265 A VdWContact
Arg 6 NTc.Cm1 N-term ARG 269 A VdWContact
Arg 6 NTc.Cm1 N-term ARG 280 A VdWContact
Gln 8 CX.4 CX PRO 29 A Hydrophobic
Gln 8 CX.4 CX PRO 29 A VdWContact
Cys 9 CX.5 CX PRO 29 A Hydrophobic
Ile 10 cxb1.1 N-loop GLU 275 A Hydrophobic
Lys 11 cxb1.2 N-loop ASP 26 A HBDonor
Lys 11 cxb1.2 N-loop ASP 26 A Cationic
Lys 11 cxb1.2 N-loop ASP 26 A VdWContact
Lys 11 cxb1.2 N-loop TYR 27 A VdWContact
Tyr 13 cxb1.6 N-loop PRO 22 A Hydrophobic
Tyr 13 cxb1.6 N-loop PRO 22 A VdWContact
Lys 15 cxb1.8 N-loop PRO 21 A Cationic
Lys 15 cxb1.8 N-loop PRO 21 A VdWContact
Lys 15 cxb1.8 N-loop PRO 22 A VdWContact
Pro 32 b1b2.9 30s-loop THR 195 A Hydrophobic
Pro 32 b1b2.9 30s-loop THR 195 A HBAcceptor
Pro 32 b1b2.9 30s-loop THR 195 A VdWContact
Pro 32 b1b2.9 30s-loop TYR 178 A Hydrophobic
Pro 32 b1b2.9 30s-loop TYR 178 A VdWContact
Ile 40 B2.3 B2 PRO 29 A Hydrophobic
Arg 47 b2b3.12 40s-loop PRO 22 A VdWContact
Arg 47 b2b3.12 40s-loop ALA 23 A VdWContact
Glu 48 B3.1 B3 SER 28 A HBAcceptor
Glu 48 B3.1 B3 SER 28 A VdWContact
Glu 48 B3.1 B3 TYR 27 A VdWContact
Leu 49 B3.2 B3 TYR 27 A Hydrophobic
Leu 49 B3.2 B3 TYR 27 A VdWContact
CHEMOKINE DIAGRAM
I E S G P H C A N T 30s-loop S D G R 40s-loop D P K E 50s-loopC-term S A K E L R C Q C I K T Y S K P F H P K N-term V R L E K I F E I I V K L L C L E N W V Q R V V E K F L K R A
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical