Interactions for 7RKF — Binding Partner: US28


Structure details

  • Chemokine Chain: L
  • Partner Chain: R
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Chemokine diagram

K R A I I L E T R 30s-loop A D P 40s-loop V K D A 50s-loopC-term H H G V T K C N I T C S K M T S K I P V A L L I H Y Q N-term G C S A Q N Q Q H R L F C W Q E K M Q H L D R

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
His 2 NTc.Cm12 N-term TYR 112 R Hydrophobic
His 2 NTc.Cm12 N-term PHE 111 R Hydrophobic
His 2 NTc.Cm12 N-term PHE 111 R PiStacking
His 2 NTc.Cm12 N-term TYR 40 R VdWContact
His 3 NTc.Cm11 N-term LEU 273 R Hydrophobic
Gly 4 NTc.Cm10 N-term ILE 274 R VdWContact
Val 5 NTc.Cm9 N-term LEU 93 R Hydrophobic
Val 5 NTc.Cm9 N-term LEU 93 R VdWContact
Thr 6 NTc.Cm8 N-term LEU 29 R VdWContact
Asn 9 NTc.Cm5 N-term PHE 25 R Hydrophobic
Asn 9 NTc.Cm5 N-term PHE 25 R VdWContact
Asn 9 NTc.Cm5 N-term VAL 24 R Hydrophobic
Asn 9 NTc.Cm5 N-term VAL 24 R VdWContact
Cys 12 NTc.Cm2 N-term PRO 22 R VdWContact
Lys 14 CX.1 CX ALA 20 R Hydrophobic
Pro 20 cxb1.2 N-loop ASP 15 R Hydrophobic
Leu 23 cxb1.8 N-loop ASP 15 R Hydrophobic
Ala 32 B1.4 B1 ASP 170 R Hydrophobic
Ser 33 B1.5 B1 MET 174 R VdWContact
Cys 34 B1.6 B1 MET 174 R Hydrophobic
Cys 34 B1.6 B1 MET 174 R VdWContact
Arg 37 b1b2.6 30s-loop ASP 178 R Cationic
Arg 37 b1b2.6 30s-loop ASP 178 R VdWContact
Leu 48 B2.4 B2 PRO 22 R Hydrophobic
Phe 49 B2.5 B2 GLU 18 R Hydrophobic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)