Interactions for 4RAU — Binding Partner: RTOFab


Structure details

  • Chemokine Chain: X
  • Partner Chain: V,W
Download Full PDB

3D view

NGL viewer powered by MMTF.


Chemokine diagram

K A G P H C P T A Q 30s-loop K N G R 40s-loop D L Q A 50s-loopC-term E D G D L Q C L C V K T T S Q V R P R H N-term I V E L S T I L I A T L L C I K P L Y K K I I K K L L E
Pick color:
 
 
 
 
 
 
 
 
 
 
 
 


Interactions for this Binding Partner

Download list in excel
Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 7 60 N-term LYS 95 V HBAcceptor
Asp 7 60 N-term LYS 95 V Anionic
Asp 7 60 N-term LYS 95 V VdWContact
Lys 31 90 30s-loop SER 55 W VdWContact
Ala 32 91 30s-loop LEU 103 W HBDonor
Ala 32 91 30s-loop LEU 103 W VdWContact
Ala 32 91 30s-loop TYR 106 W Hydrophobic
Ala 32 91 30s-loop TYR 106 W VdWContact
Gly 33 92 30s-loop TYR 106 W VdWContact
Pro 34 93 30s-loop TYR 61 W Hydrophobic
Pro 34 93 30s-loop LEU 96 V Hydrophobic
Pro 34 93 30s-loop TYR 98 V Hydrophobic
Pro 34 93 30s-loop TYR 98 V VdWContact
His 35 94 30s-loop TYR 61 W Hydrophobic
His 35 94 30s-loop TYR 61 W VdWContact
Pro 37 96 30s-loop TYR 34 V Hydrophobic
Pro 37 96 30s-loop TYR 34 V VdWContact
Pro 37 96 30s-loop PHE 93 V Hydrophobic
Pro 37 96 30s-loop PHE 93 V VdWContact
Thr 38 97 30s-loop LEU 104 W VdWContact
Ala 39 99 30s-loop LEU 103 W VdWContact
Ala 39 99 30s-loop LEU 104 W HBDonor
Ala 39 99 30s-loop LEU 104 W VdWContact
Ile 63 128 Helix LEU 104 W Hydrophobic
Glu 69 134 Helix ARG 33 W VdWContact

Interaction pattern search
Search complexes with similar interaction patterns:

Specify the minimum similarity (0.00 no similarity, 1.00 identical)