Interactions

8XX6 | CXCL8_HUMAN — CXCR2

Residue contacts: 69
SUMMARY
Protein
CXCL8_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P10145 View on UniProt
PDB ID
8XX6 View on PDB
Method
Cryo-em
Resolution
2.99 Å
Date
Jan. 15, 2025
Reference
-
State
Dimer
Chain information
Chemokine chain
D
Partner chain
R
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Arg - NTc.Cm7 N-term SER 43 R VdWContact
Arg - NTc.Cm7 N-term SER 193 R HBAcceptor
Arg - NTc.Cm7 N-term SER 193 R VdWContact
Arg - NTc.Cm7 N-term VAL 192 R VdWContact
Ser 1 NTc.Cm6 N-term LYS 108 R HBDonor
Ser 1 NTc.Cm6 N-term LYS 108 R VdWContact
Ala 2 NTc.Cm5 N-term VAL 192 R Hydrophobic
Lys 3 NTc.Cm4 N-term GLU 300 R HBDonor
Lys 3 NTc.Cm4 N-term GLU 300 R Cationic
Lys 3 NTc.Cm4 N-term GLU 300 R VdWContact
Lys 3 NTc.Cm4 N-term LYS 108 R VdWContact
Lys 3 NTc.Cm4 N-term ASP 297 R HBDonor
Lys 3 NTc.Cm4 N-term ASP 297 R Cationic
Lys 3 NTc.Cm4 N-term ASP 297 R VdWContact
Glu 4 NTc.Cm3 N-term ARG 278 R HBAcceptor
Glu 4 NTc.Cm3 N-term ARG 278 R Anionic
Glu 4 NTc.Cm3 N-term ARG 278 R VdWContact
Glu 4 NTc.Cm3 N-term LEU 296 R Hydrophobic
Glu 4 NTc.Cm3 N-term ASP 274 R VdWContact
Glu 4 NTc.Cm3 N-term ARG 212 R HBAcceptor
Glu 4 NTc.Cm3 N-term ARG 212 R Anionic
Glu 4 NTc.Cm3 N-term ARG 212 R VdWContact
Glu 4 NTc.Cm3 N-term ARG 208 R HBAcceptor
Glu 4 NTc.Cm3 N-term ARG 208 R Anionic
Glu 4 NTc.Cm3 N-term ARG 208 R VdWContact
Leu 5 NTc.Cm2 N-term ARG 278 R HBAcceptor
Leu 5 NTc.Cm2 N-term ARG 278 R VdWContact
Leu 5 NTc.Cm2 N-term SER 189 R VdWContact
Leu 5 NTc.Cm2 N-term TYR 197 R Hydrophobic
Leu 5 NTc.Cm2 N-term VAL 192 R Hydrophobic
Leu 5 NTc.Cm2 N-term VAL 187 R Hydrophobic
Arg 6 NTc.Cm1 N-term ASP 293 R HBDonor
Arg 6 NTc.Cm1 N-term ASP 293 R Cationic
Arg 6 NTc.Cm1 N-term ASP 293 R VdWContact
Arg 6 NTc.Cm1 N-term ASP 274 R HBDonor
Arg 6 NTc.Cm1 N-term ASP 274 R Cationic
Arg 6 NTc.Cm1 N-term ASP 274 R VdWContact
Cys 7 CX.1 CX ARG 289 R HBAcceptor
Cys 7 CX.1 CX ARG 289 R VdWContact
Gln 8 CX.4 CX ASN 191 R HBAcceptor
Gln 8 CX.4 CX ASN 191 R VdWContact
Gln 8 CX.4 CX CYS 39 R HBAcceptor
Gln 8 CX.4 CX CYS 39 R VdWContact
Gln 8 CX.4 CX PRO 38 R VdWContact
Ile 10 cxb1.1 N-loop ARG 289 R VdWContact
Ile 10 cxb1.1 N-loop GLU 284 R Hydrophobic
Tyr 13 cxb1.6 N-loop PRO 31 R Hydrophobic
Tyr 13 cxb1.6 N-loop PRO 31 R VdWContact
Phe 17 cxb1.11 N-loop PRO 31 R Hydrophobic
Phe 17 cxb1.11 N-loop PRO 31 R VdWContact
Phe 21 B1.1 B1 PRO 30 R Hydrophobic
Phe 21 B1.1 B1 PRO 31 R Hydrophobic
Ser 30 b1b2.7 30s-loop ASN 202 R HBDonor
Ser 30 b1b2.7 30s-loop ASN 202 R VdWContact
Pro 32 b1b2.9 30s-loop ASP 199 R Hydrophobic
Pro 32 b1b2.9 30s-loop THR 204 R Hydrophobic
Pro 32 b1b2.9 30s-loop THR 204 R VdWContact
Pro 32 b1b2.9 30s-loop VAL 187 R Hydrophobic
Ile 40 B2.3 B2 PRO 38 R Hydrophobic
Leu 43 B2.6 B2 PRO 31 R Hydrophobic
Arg 47 b2b3.12 40s-loop LEU 33 R Hydrophobic
Arg 47 b2b3.12 40s-loop LEU 33 R VdWContact
Arg 47 b2b3.12 40s-loop PHE 32 R VdWContact
Glu 48 B3.1 B3 PRO 38 R Hydrophobic
Glu 48 B3.1 B3 PRO 38 R VdWContact
Leu 49 B3.2 B3 LEU 33 R Hydrophobic
Leu 49 B3.2 B3 PRO 31 R Hydrophobic
Leu 49 B3.2 B3 ALA 36 R Hydrophobic
Leu 49 B3.2 B3 ALA 36 R VdWContact
CHEMOKINE DIAGRAM
I E S G P H C A N T 30s-loop S D G R 40s-loop D P K E 50s-loopC-term P R S A K E L R C Q C I K T Y S K P F H P K N-term V R L E K I F E I I V K L L C L E N W V Q R V V E K F L K R A E N
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical