ChemoPar-db - the chemokine partner database

Interactions for 5D65 — Binding Partner: CCL3

Structure details

PDB ID: 5D65 open_in_new
Protein: CCL3_HUMAN
Organism: Homo sapiens
UniProt ID: P10147 open_in_new

Method: X-ray
Resolution: 3.1 Å
Date: April 20, 2016
Reference: 10.1073/PNAS.1523981113 open_in_new
State: Oligomer

Chemokine Chain: D
Partner Chain: A,B,C,E

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Interactions for this Binding Partner

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Chemokine Residue	Generic Number	Segment	Partner Residue	Partner Chain	Interaction Type

Chemokine Residue	Generic Number	Segment	Partner Residue	Partner Chain	Interaction Type
Ala 10	62	N-term	PRO 8	E	Hydrophobic
Ala 10	62	N-term	PRO 8	E	VdWContact
Ala 10	62	N-term	LEU 3	B	Hydrophobic
Ala 5	57	N-term	SER 32	B	VdWContact
Ala 5	57	N-term	GLU 30	B	VdWContact
Asp 27	85	B1	ARG 48	C	HBAcceptor
Asp 27	85	B1	ARG 48	C	Anionic
Asp 27	85	B1	ARG 48	C	VdWContact
Asp 27	85	B1	ARG 46	C	HBAcceptor
Asp 27	85	B1	ARG 46	C	Anionic
Asp 6	58	N-term	THR 16	E	VdWContact
Asp 6	58	N-term	SER 33	B	HBAcceptor
Asp 6	58	N-term	SER 33	B	VdWContact
Asp 6	58	N-term	CYS 51	E	HBAcceptor
Asp 6	58	N-term	CYS 51	E	VdWContact
Asp 6	58	N-term	SER 32	B	HBAcceptor
Asp 6	58	N-term	SER 32	B	VdWContact
Asp 6	58	N-term	VAL 50	E	Hydrophobic
Cys 11	63	CX	THR 9	E	HBAcceptor
Cys 11	63	CX	THR 9	E	HBDonor
Cys 11	63	CX	THR 9	E	VdWContact
Gln 34	94	30s-loop	PHE 13	E	Hydrophobic
Gln 34	94	30s-loop	PHE 13	E	VdWContact
Gln 49	115	B3	LEU 3	B	VdWContact
Gln 49	115	B3	PRO 8	E	Hydrophobic
Glu 30	88	B1	ALA 5	B	VdWContact
Glu 67	133	Helix	PHE 24	C	Hydrophobic
Glu 67	133	Helix	ARG 46	C	Hydrophobic
Glu 67	133	Helix	ARG 46	C	VdWContact
Glu 67	133	Helix	LYS 45	C	HBAcceptor
Glu 67	133	Helix	LYS 45	C	VdWContact
Glu 67	133	Helix	THR 44	C	VdWContact
Ile 41	102	B2	PRO 8	E	Hydrophobic
Ile 41	102	B2	PRO 8	E	VdWContact
Ile 41	102	B2	LEU 3	B	Hydrophobic
Leu 3	55	N-term	ALA 10	B	Hydrophobic
Leu 3	55	N-term	ALA 10	B	VdWContact
Leu 3	55	N-term	GLN 49	B	VdWContact
Leu 3	55	N-term	PHE 29	B	Hydrophobic
Leu 3	55	N-term	ILE 41	B	Hydrophobic
Leu 3	55	N-term	PRO 8	C	Hydrophobic
Leu 66	132	Helix	ARG 46	C	HBAcceptor
Leu 66	132	Helix	ARG 46	C	VdWContact
Leu 68	134	Helix	PHE 24	C	Hydrophobic
Leu 68	134	Helix	ASN 23	C	Hydrophobic
Leu 68	134	Helix	ASN 23	C	VdWContact
Phe 13	68	N-loop	THR 9	E	Hydrophobic
Phe 13	68	N-loop	THR 9	E	VdWContact
Phe 13	68	N-loop	CYS 11	E	VdWContact
Phe 13	68	N-loop	GLN 34	E	Hydrophobic
Phe 13	68	N-loop	GLN 34	E	VdWContact
Phe 29	87	B1	LEU 3	B	Hydrophobic
Phe 29	87	B1	LEU 3	B	VdWContact
Phe 29	87	B1	ARG 48	C	VdWContact
Pro 8	60	N-term	CYS 11	E	VdWContact
Pro 8	60	N-term	ILE 41	E	Hydrophobic
Pro 8	60	N-term	ILE 41	E	VdWContact
Pro 8	60	N-term	ALA 10	E	Hydrophobic
Pro 8	60	N-term	GLN 49	E	Hydrophobic
Ser 14	69	N-loop	ASP 6	E	HBDonor
Ser 14	69	N-loop	ASP 6	E	VdWContact
Ser 32	90	30s-loop	ALA 5	B	VdWContact
Ser 32	90	30s-loop	ASP 6	B	HBDonor
Ser 32	90	30s-loop	ASP 6	B	VdWContact
Ser 33	91	30s-loop	TYR 15	C	HBDonor
Ser 33	91	30s-loop	TYR 15	C	VdWContact
Ser 33	91	30s-loop	SER 17	C	VdWContact
Ser 33	91	30s-loop	ASP 6	B	HBDonor
Ser 33	91	30s-loop	ASP 6	B	VdWContact
Ser 36	96	30s-loop	CL 103	E	VdWContact
Thr 16	71	N-loop	ASP 6	E	VdWContact
Thr 7	59	N-term	GLN 49	E	Hydrophobic
Thr 7	59	N-term	GLN 49	E	VdWContact
Thr 9	61	N-term	CYS 11	E	HBAcceptor
Thr 9	61	N-term	CYS 11	E	HBDonor
Thr 9	61	N-term	CYS 11	E	VdWContact
Thr 9	61	N-term	PHE 13	E	Hydrophobic
Thr 9	61	N-term	PHE 13	E	VdWContact
Tyr 28	86	B1	ARG 48	C	VdWContact
Tyr 28	86	B1	ARG 46	C	VdWContact
Val 50	116	B3	ASP 6	E	Hydrophobic
Val 63	129	Helix	PHE 24	C	Hydrophobic

Showing 1 to 82 of 82 entries

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