Interactions for 5EKI — Binding Partner: CCL21


Structure details

  • Chemokine Chain: A
  • Partner Chain: F,D
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Chemokine diagram

E P S L G C S I P A 30s-loop R K R S Q A 40s-loop D P K E 50s-loopC-term Q D C C L K Y S Q R K I P A K V N-term Q K R Y S R V I L F L P A C L E L W V Q Q L M Q H L D K T P S P Q K P A
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 7 62 N-term PRO 73 F Hydrophobic
Asp 7 62 N-term PRO 73 F VdWContact
Asp 7 62 N-term ARG 26 F HBAcceptor
Asp 7 62 N-term ARG 26 F Anionic
Asp 7 62 N-term ARG 26 F VdWContact
Asp 7 62 N-term GLN 74 F VdWContact
Asp 7 62 N-term LYS 75 F Anionic
Cys 8 63 CX GLN 74 F HBAcceptor
Cys 8 63 CX GLN 74 F HBDonor
Cys 8 63 CX GLN 74 F VdWContact
Leu 10 68 N-loop GLN 74 F Hydrophobic
Lys 11 69 N-loop PRO 71 F Hydrophobic
Lys 11 69 N-loop ASP 68 F Hydrophobic
Lys 11 69 N-loop ASP 68 F Cationic
Lys 11 69 N-loop ASP 68 F VdWContact
Ser 13 71 N-loop PRO 71 F VdWContact
Gln 14 72 N-loop LYS 69 F HBDonor
Gln 14 72 N-loop LYS 69 F VdWContact
Arg 15 73 N-loop LYS 69 F VdWContact
Arg 23 84 B1 ALA 49 D Hydrophobic
Arg 26 87 B1 ASP 7 D HBDonor
Arg 26 87 B1 ASP 7 D Cationic
Arg 26 87 B1 ASP 7 D VdWContact
Leu 40 102 B2 PRO 73 F Hydrophobic
Arg 44 106 40s-loop SER 47 D VdWContact
Arg 46 108 40s-loop ARG 46 D VdWContact
Arg 46 108 40s-loop ARG 46 F VdWContact
Ser 47 109 40s-loop ARG 44 F VdWContact
Ala 49 114 40s-loop ARG 23 F Hydrophobic
Glu 50 115 B3 PRO 73 F Hydrophobic
Glu 50 115 B3 SER 72 F VdWContact
Leu 51 116 B3 PRO 71 F VdWContact
Leu 51 116 B3 THR 70 F Hydrophobic
Cys 52 117 B3 PRO 71 F Hydrophobic
Cys 52 117 B3 PRO 71 F HBDonor
Cys 52 117 B3 PRO 71 F VdWContact
Asp 68 133 Helix LYS 11 D Hydrophobic
Asp 68 133 Helix LYS 11 D HBAcceptor
Asp 68 133 Helix LYS 11 D Anionic
Asp 68 133 Helix LYS 11 D VdWContact
Lys 69 134 Helix GLN 14 D HBAcceptor
Lys 69 134 Helix GLN 14 D VdWContact
Thr 70 135 Helix ARG 15 D Hydrophobic
Pro 71 136 C-term CYS 52 D Hydrophobic
Pro 71 136 C-term CYS 52 D HBAcceptor
Pro 71 136 C-term CYS 52 D VdWContact
Pro 71 136 C-term LYS 11 D Hydrophobic
Pro 71 136 C-term SER 13 D VdWContact
Pro 71 136 C-term LEU 51 D VdWContact
Ser 72 137 C-term GLU 50 D VdWContact
Pro 73 138 C-term LEU 40 D Hydrophobic
Pro 73 138 C-term GLU 50 D Hydrophobic
Pro 73 138 C-term ASP 7 D Hydrophobic
Gln 74 139 C-term CYS 8 D HBAcceptor
Gln 74 139 C-term CYS 8 D HBDonor
Gln 74 139 C-term CYS 8 D VdWContact
Gln 74 139 C-term ASP 7 D VdWContact
Gln 74 139 C-term LEU 10 D Hydrophobic
Lys 75 140 C-term ASP 7 D VdWContact
Pro 76 141 C-term GLN 6 D Hydrophobic

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