Interactions for 5L2U — Binding Partner: CCL5


Structure details

  • Chemokine Chain: C
  • Partner Chain: A
Download Full PDB

3D view

NGL viewer powered by MMTF.


Chemokine diagram

S G K C S N P A 30s-loop R K N R 40s-loop N P E K 50s-loopC-term S S D T T P C C F A Y I A R P L P R A H N-term T Y F Y E K I V V F V T A C V Q K W V R E Y I N S L E M S
Pick color:
 
 
 
 
 
 
 
 
 
 
 
 


Interactions for this Binding Partner

Download list in excel
Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Glu 26 85 B1 ARG 47 A Anionic
Glu 26 85 B1 ARG 47 A VdWContact
Tyr 27 86 B1 ARG 47 A Hydrophobic
Tyr 27 86 B1 ARG 47 A HBAcceptor
Tyr 27 86 B1 ARG 47 A VdWContact
Tyr 29 88 B1 LEU 19 A Hydrophobic
Tyr 29 88 B1 ILE 15 A Hydrophobic
Tyr 29 88 B1 VAL 49 A Hydrophobic
Lys 33 94 30s-loop ALA 13 A Hydrophobic
Arg 59 126 Helix ARG 17 A VdWContact
Ile 62 129 Helix HIS 23 A Hydrophobic
Asn 63 130 Helix HIS 23 A Hydrophobic
Asn 63 130 Helix HIS 23 A HBAcceptor
Asn 63 130 Helix HIS 23 A VdWContact
Glu 66 133 Helix LYS 45 A HBAcceptor
Glu 66 133 Helix LYS 45 A VdWContact
Glu 66 133 Helix THR 43 A HBAcceptor
Glu 66 133 Helix THR 43 A VdWContact
Glu 66 133 Helix HIS 23 A Hydrophobic
Met 67 134 Helix ARG 44 A VdWContact
Met 67 134 Helix ALA 22 A Hydrophobic
Met 67 134 Helix ALA 22 A VdWContact
Met 67 134 Helix HIS 23 A Hydrophobic
Ser 68 135 Helix LYS 45 A HBAcceptor
Ser 68 135 Helix LYS 45 A VdWContact

Interaction pattern search
Search complexes with similar interaction patterns:

Specify the minimum similarity (0.00 no similarity, 1.00 identical)