Interactions for 8XX7 — Binding Partner: CXCL5
Structure details
- PDB ID: 8XX7 open_in_new
- Protein: CXCL5_HUMAN
- Organism: Homo sapiens
- UniProt ID: P42830 open_in_new
- Method: Cryo-em
- Resolution: 3.32 Å
- Date: Jan. 15, 2025
- Reference: open_in_new
- State: Dimer
- Chemokine Chain: D
- Partner Chain: B
Chemokine diagram
Interactions for this Binding Partner
Download list as CSV
| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Ser 28 | B1.3 | B1 | ALA 34 | B | HBAcceptor |
| Ser 28 | B1.3 | B1 | ALA 34 | B | VdWContact |
| Asn 29 | B1.4 | B1 | PHE 33 | B | VdWContact |
| Asn 29 | B1.4 | B1 | VAL 32 | B | HBDonor |
| Asn 29 | B1.4 | B1 | VAL 32 | B | VdWContact |
| Leu 30 | B1.5 | B1 | VAL 32 | B | HBAcceptor |
| Leu 30 | B1.5 | B1 | VAL 32 | B | HBDonor |
| Leu 30 | B1.5 | B1 | VAL 32 | B | VdWContact |
| Gln 31 | B1.6 | B1 | GLN 31 | B | Hydrophobic |
| Val 32 | B1.7 | B1 | ASN 29 | B | HBAcceptor |
| Val 32 | B1.7 | B1 | ASN 29 | B | VdWContact |
| Val 32 | B1.7 | B1 | LEU 30 | B | HBAcceptor |
| Val 32 | B1.7 | B1 | LEU 30 | B | HBDonor |
| Val 32 | B1.7 | B1 | LEU 30 | B | VdWContact |
| Val 32 | B1.7 | B1 | ILE 70 | B | Hydrophobic |
| Val 32 | B1.7 | B1 | LEU 71 | B | Hydrophobic |
| Phe 33 | b1b2.4 | 30s-loop | ASN 29 | B | VdWContact |
| Ala 34 | b1b2.6 | 30s-loop | ILE 70 | B | Hydrophobic |
| Ala 34 | b1b2.6 | 30s-loop | ILE 70 | B | VdWContact |
| Ala 34 | b1b2.6 | 30s-loop | SER 28 | B | HBDonor |
| Ala 34 | b1b2.6 | 30s-loop | SER 28 | B | VdWContact |
| Val 42 | b1b2.16 | 30s-loop | ILE 70 | B | VdWContact |
| Val 42 | b1b2.16 | 30s-loop | LEU 71 | B | Hydrophobic |
| Val 42 | b1b2.16 | 30s-loop | LEU 71 | B | VdWContact |
| Val 44 | B2.2 | B2 | LEU 71 | B | Hydrophobic |
| Leu 63 | H.3 | Helix | LEU 71 | B | Hydrophobic |
| Leu 63 | H.3 | Helix | LEU 71 | B | VdWContact |
| Ile 67 | H.7 | Helix | ILE 67 | B | Hydrophobic |
| Ile 67 | H.7 | Helix | LEU 71 | B | Hydrophobic |
| Ile 70 | H.10 | Helix | ALA 34 | B | Hydrophobic |
| Ile 70 | H.10 | Helix | ALA 34 | B | VdWContact |
| Ile 70 | H.10 | Helix | VAL 32 | B | Hydrophobic |
| Ile 70 | H.10 | Helix | VAL 42 | B | VdWContact |
| Leu 71 | CT.1 | C-term | VAL 32 | B | Hydrophobic |
| Leu 71 | CT.1 | C-term | VAL 44 | B | Hydrophobic |
| Leu 71 | CT.1 | C-term | ILE 67 | B | Hydrophobic |
| Leu 71 | CT.1 | C-term | LEU 63 | B | Hydrophobic |
| Leu 71 | CT.1 | C-term | LEU 63 | B | VdWContact |
| Leu 71 | CT.1 | C-term | VAL 42 | B | Hydrophobic |
| Leu 71 | CT.1 | C-term | VAL 42 | B | VdWContact |
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