Interactions for 1MGS — Binding Partner: CXCL1


Structure details


  • Chemokine Chain: A
  • Partner Chain: B

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Chemokine diagram


K S P G P H C A Q T 30s-loop K N G R 40s-loop N P A S 50s-loopC-term A S V A T E L R C Q C L Q T L Q G I H P K N-term V N V S Q I N E V I A T L L C A K P I V K K I I E K M L N S D K S N

Interactions for this Binding Partner


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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Gln 24 B1.3 B1 HIS 34 B VdWContact
Gln 24 B1.3 B1 SER 30 B HBAcceptor
Gln 24 B1.3 B1 SER 30 B VdWContact
Ser 25 B1.4 B1 LYS 29 B VdWContact
Ser 25 B1.4 B1 VAL 28 B VdWContact
Val 26 B1.5 B1 VAL 28 B Hydrophobic
Val 26 B1.5 B1 VAL 28 B HBAcceptor
Val 26 B1.5 B1 VAL 28 B HBDonor
Val 26 B1.5 B1 VAL 28 B VdWContact
Val 26 B1.5 B1 VAL 26 B VdWContact
Asn 27 B1.6 B1 ASN 27 B VdWContact
Val 28 B1.7 B1 MET 66 B Hydrophobic
Val 28 B1.7 B1 MET 66 B VdWContact
Val 28 B1.7 B1 SER 25 B VdWContact
Val 28 B1.7 B1 VAL 26 B Hydrophobic
Val 28 B1.7 B1 VAL 26 B HBAcceptor
Val 28 B1.7 B1 VAL 26 B HBDonor
Val 28 B1.7 B1 VAL 26 B VdWContact
Lys 29 b1b2.4 30s-loop SER 25 B VdWContact
Ser 30 b1b2.6 30s-loop GLN 24 B HBDonor
Ser 30 b1b2.6 30s-loop GLN 24 B VdWContact
His 34 b1b2.10 30s-loop GLN 24 B VdWContact
Thr 38 b1b2.16 30s-loop ASP 70 B Hydrophobic
Thr 38 b1b2.16 30s-loop ASP 70 B VdWContact
Pro 54 b3h.2 50s-loop ASP 70 B Hydrophobic
Lys 60 H.4 Helix ASP 70 B HBDonor
Lys 60 H.4 Helix ASP 70 B Cationic
Lys 60 H.4 Helix ASP 70 B VdWContact
Ile 63 H.7 Helix LEU 67 B Hydrophobic
Ile 63 H.7 Helix LEU 67 B VdWContact
Met 66 H.10 Helix VAL 28 B Hydrophobic
Met 66 H.10 Helix VAL 28 B VdWContact
Leu 67 CT.1 C-term LEU 67 B Hydrophobic
Leu 67 CT.1 C-term ILE 63 B Hydrophobic
Leu 67 CT.1 C-term ILE 63 B VdWContact
Asp 70 CT.4 C-term LYS 60 B HBAcceptor
Asp 70 CT.4 C-term LYS 60 B Anionic
Asp 70 CT.4 C-term LYS 60 B VdWContact
Asp 70 CT.4 C-term THR 38 B Hydrophobic
Asp 70 CT.4 C-term THR 38 B VdWContact
Asp 70 CT.4 C-term PRO 54 B Hydrophobic

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)