Interactions for 1ROD — Binding Partner: CXCL8


Structure details

  • Chemokine Chain: A
  • Partner Chain: B
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Chemokine diagram

E S G P H C A N T E 30s-loop S D G R 40s-loop D P A S 50s-loopC-term S A K E L R C Q C I K T Y S K P F H P K F N-term I V R L E K I I I V K L L C L E P I V K K I I E K M L N S D K S N
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Lys 20 81 N-loop GLU 29 B VdWContact
Ile 22 83 B1 GLU 29 B Hydrophobic
Ile 22 83 B1 GLU 29 B VdWContact
Lys 23 84 B1 ILE 28 B VdWContact
Lys 23 84 B1 ASN 36 B Hydrophobic
Lys 23 84 B1 VAL 27 B VdWContact
Lys 23 84 B1 GLU 29 B HBAcceptor
Lys 23 84 B1 GLU 29 B VdWContact
Lys 23 84 B1 SER 30 B VdWContact
Glu 24 85 B1 ILE 28 B Hydrophobic
Glu 24 85 B1 ILE 28 B VdWContact
Glu 24 85 B1 ARG 26 B Hydrophobic
Glu 24 85 B1 ARG 26 B Anionic
Glu 24 85 B1 ARG 26 B VdWContact
Glu 24 85 B1 VAL 27 B VdWContact
Leu 25 86 B1 LEU 25 B VdWContact
Leu 25 86 B1 VAL 27 B Hydrophobic
Leu 25 86 B1 VAL 27 B HBAcceptor
Leu 25 86 B1 VAL 27 B HBDonor
Leu 25 86 B1 VAL 27 B VdWContact
Leu 25 86 B1 ARG 26 B VdWContact
Arg 26 87 B1 LEU 25 B VdWContact
Arg 26 87 B1 ARG 26 B Hydrophobic
Arg 26 87 B1 ARG 26 B VdWContact
Arg 26 87 B1 GLU 24 B Hydrophobic
Arg 26 87 B1 GLU 24 B Cationic
Arg 26 87 B1 GLU 24 B VdWContact
Val 27 88 B1 LYS 23 B VdWContact
Val 27 88 B1 LEU 25 B Hydrophobic
Val 27 88 B1 LEU 25 B HBAcceptor
Val 27 88 B1 LEU 25 B HBDonor
Val 27 88 B1 LEU 25 B VdWContact
Val 27 88 B1 GLU 24 B VdWContact
Ile 28 89 B1 LYS 23 B VdWContact
Ile 28 89 B1 GLU 24 B Hydrophobic
Ile 28 89 B1 GLU 24 B VdWContact
Glu 29 90 30s-loop LYS 20 B VdWContact
Glu 29 90 30s-loop LYS 23 B HBDonor
Glu 29 90 30s-loop LYS 23 B VdWContact
Glu 29 90 30s-loop ILE 22 B Hydrophobic
Glu 29 90 30s-loop ILE 22 B VdWContact
Ser 30 91 30s-loop LYS 23 B VdWContact
Asn 36 97 30s-loop LYS 23 B Hydrophobic
Asn 36 97 30s-loop LYS 23 B VdWContact

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