Interactions

4ZK9 | CCL2_HUMAN — ORFV

SUMMARY
Protein
CCL2_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P13500 View on UniProt
PDB ID
4ZK9 View on PDB
Method
X-ray
Resolution
2.6 Å
Date
July 8, 2015
Reference
10.1016/J.STR.2015.04.023 Open DOI
State
Dimer
Chain information
Chemokine chain
A
Partner chain
A
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  • Chemokine chain of interest
  • GPCR
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  • Antibody
  • GAG
  • RNA
  • Peptide
  • Small molecule
  • Chemokine

INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Ser 14 NTc.Cm30 N-term TRP 120 A Hydrophobic
Ser 14 NTc.Cm30 N-term TRP 120 A VdWContact
Leu 17 NTc.Cm27 N-term TRP 120 A Hydrophobic
Leu 17 NTc.Cm27 N-term PRO 119 A VdWContact
Ala 24 NTc.Cm20 N-term ASP 126 A Hydrophobic
Ala 24 NTc.Cm20 N-term ASP 126 A VdWContact
Ala 25 NTc.Cm19 N-term ASP 126 A HBDonor
Ala 25 NTc.Cm19 N-term ASP 126 A VdWContact
Ala 25 NTc.Cm19 N-term LEU 127 A HBAcceptor
Ala 25 NTc.Cm19 N-term LEU 127 A VdWContact
Thr 26 NTc.Cm18 N-term ASP 126 A Hydrophobic
Thr 26 NTc.Cm18 N-term THR 124 A VdWContact
Ile 28 NTc.Cm16 N-term ALA 118 A VdWContact
Ile 28 NTc.Cm16 N-term SER 116 A VdWContact
Pro 29 NTc.Cm15 N-term SER 115 A VdWContact
Pro 29 NTc.Cm15 N-term PHE 94 A Hydrophobic
Pro 29 NTc.Cm15 N-term PHE 94 A VdWContact
Pro 29 NTc.Cm15 N-term SER 116 A HBDonor
Pro 29 NTc.Cm15 N-term SER 116 A HBAcceptor
Pro 29 NTc.Cm15 N-term SER 116 A VdWContact
Pro 29 NTc.Cm15 N-term VAL 114 A Hydrophobic
Gln 30 NTc.Cm14 N-term VAL 114 A VdWContact
Gly 31 NTc.Cm13 N-term ASN 113 A VdWContact
Gly 31 NTc.Cm13 N-term VAL 114 A Hydrophobic
Gly 31 NTc.Cm13 N-term VAL 114 A HBDonor
Gly 31 NTc.Cm13 N-term VAL 114 A HBAcceptor
Gly 31 NTc.Cm13 N-term VAL 114 A VdWContact
Ala 33 NTc.Cm11 N-term TYR 111 A VdWContact
Ala 33 NTc.Cm11 N-term VAL 112 A Hydrophobic
Ala 33 NTc.Cm11 N-term VAL 112 A HBDonor
Ala 33 NTc.Cm11 N-term VAL 112 A HBAcceptor
Ala 33 NTc.Cm11 N-term VAL 112 A VdWContact
Gln 34 NTc.Cm10 N-term TYR 109 A Hydrophobic
Gln 34 NTc.Cm10 N-term TYR 109 A CationPi
Gln 34 NTc.Cm10 N-term TYR 109 A VdWContact
Gln 34 NTc.Cm10 N-term TYR 111 A Hydrophobic
Gln 34 NTc.Cm10 N-term LEU 110 A VdWContact
Pro 35 NTc.Cm9 N-term TYR 109 A VdWContact
Pro 35 NTc.Cm9 N-term LEU 110 A Hydrophobic
Pro 35 NTc.Cm9 N-term LEU 110 A HBDonor
Pro 35 NTc.Cm9 N-term LEU 110 A HBAcceptor
Pro 35 NTc.Cm9 N-term LEU 110 A VdWContact
Ala 37 NTc.Cm7 N-term SER 108 A HBDonor
Ala 37 NTc.Cm7 N-term SER 108 A HBAcceptor
Ala 37 NTc.Cm7 N-term SER 108 A VdWContact
Ala 37 NTc.Cm7 N-term ASP 107 A VdWContact
Ile 38 NTc.Cm6 N-term ARG 212 A VdWContact
Ile 38 NTc.Cm6 N-term CYS 213 A HBDonor
Ile 38 NTc.Cm6 N-term CYS 213 A VdWContact
Asn 39 NTc.Cm5 N-term SER 104 A VdWContact
Asn 39 NTc.Cm5 N-term LEU 105 A VdWContact
Asn 39 NTc.Cm5 N-term ALA 77 A HBDonor
Asn 39 NTc.Cm5 N-term ALA 77 A VdWContact
Ala 40 NTc.Cm4 N-term LYS 154 A VdWContact
Ala 40 NTc.Cm4 N-term GLN 153 A HBDonor
Ala 40 NTc.Cm4 N-term GLN 153 A VdWContact
Thr 43 NTc.Cm1 N-term LEU 105 A Hydrophobic
Thr 43 NTc.Cm1 N-term PRO 103 A HBDonor
Thr 43 NTc.Cm1 N-term PRO 103 A VdWContact
Thr 43 NTc.Cm1 N-term ALA 77 A VdWContact
Cys 45 CX.5 CX PRO 103 A VdWContact
Tyr 46 cxb1.1 N-loop PRO 103 A VdWContact
Asn 47 cxb1.2 N-loop PHE 101 A VdWContact
Thr 49 cxb1.6 N-loop PHE 101 A Hydrophobic
Thr 49 cxb1.6 N-loop GLU 75 A VdWContact
Asn 50 cxb1.7 N-loop GLU 75 A Hydrophobic
Asn 50 cxb1.7 N-loop GLU 75 A HBDonor
Asn 50 cxb1.7 N-loop GLU 75 A HBAcceptor
Asn 50 cxb1.7 N-loop GLU 75 A VdWContact
Asn 50 cxb1.7 N-loop GLY 74 A VdWContact
Arg 51 cxb1.8 N-loop THR 73 A VdWContact
Lys 52 cxb1.10 N-loop ALA 72 A VdWContact
Lys 52 cxb1.10 N-loop THR 73 A HBDonor
Lys 52 cxb1.10 N-loop THR 73 A HBAcceptor
Lys 52 cxb1.10 N-loop THR 73 A VdWContact
Ile 53 cxb1.11 N-loop THR 71 A VdWContact
Ile 53 cxb1.11 N-loop GLU 54 A VdWContact
Ile 53 cxb1.11 N-loop PHE 94 A Hydrophobic
Ser 214 cxb1.14 N-loop PRO 211 A HBDonor
Ser 214 cxb1.14 N-loop PRO 211 A VdWContact
Ser 214 cxb1.14 N-loop VAL 209 A Hydrophobic
Ser 214 cxb1.14 N-loop ASP 210 A HBDonor
Ser 214 cxb1.14 N-loop ILE 148 A VdWContact
Ser 214 cxb1.14 N-loop CYS 213 A VdWContact
Gln 216 cxb1.16 N-loop TYR 109 A VdWContact
Arg 217 B1.1 B1 LEU 207 A VdWContact
Tyr 221 B1.5 B1 LEU 144 A VdWContact
Arg 223 B1.7 B1 ILE 203 A VdWContact
Ile 235 B2.3 B2 ILE 135 A VdWContact
Thr 238 B2.6 B2 ILE 203 A Hydrophobic
Thr 238 B2.6 B2 ILE 203 A VdWContact
Thr 238 B2.6 B2 ALA 201 A VdWContact
Ile 239 b2b3.2 40s-loop ILE 203 A HBAcceptor
Ile 239 b2b3.2 40s-loop ILE 203 A VdWContact
Ile 239 b2b3.2 40s-loop ASP 202 A VdWContact
Ile 239 b2b3.2 40s-loop ALA 201 A HBDonor
Ile 239 b2b3.2 40s-loop ALA 201 A VdWContact
Ala 241 b2b3.11 40s-loop PHE 205 A VdWContact
Lys 242 b2b3.12 40s-loop PHE 205 A Hydrophobic
Lys 242 b2b3.12 40s-loop PHE 205 A VdWContact
Lys 251 H.1 Helix TYR 111 A Hydrophobic
Lys 251 H.1 Helix TYR 111 A HBAcceptor
Lys 251 H.1 Helix TYR 111 A VdWContact
Trp 252 H.2 Helix TYR 111 A Hydrophobic
Trp 252 H.2 Helix ASN 113 A VdWContact
Asp 255 H.5 Helix TYR 111 A Hydrophobic
Asp 255 H.5 Helix TYR 111 A VdWContact
His 259 H.9 Helix PHE 101 A VdWContact
Leu 260 H.10 Helix PHE 101 A Hydrophobic
Leu 260 H.10 Helix PHE 101 A HBDonor
Leu 260 H.10 Helix PHE 101 A HBAcceptor
Leu 260 H.10 Helix PHE 101 A VdWContact
Leu 260 H.10 Helix GLY 100 A VdWContact
Asp 261 CT.1 C-term LEU 99 A VdWContact
Lys 262 CT.2 C-term GLY 98 A VdWContact
Lys 262 CT.2 C-term LEU 99 A HBDonor
Lys 262 CT.2 C-term LEU 99 A HBAcceptor
Lys 262 CT.2 C-term LEU 99 A VdWContact
Gln 263 CT.3 C-term ILE 97 A VdWContact
Thr 264 CT.4 C-term TYR 96 A VdWContact
Thr 264 CT.4 C-term ILE 97 A HBDonor
Thr 264 CT.4 C-term ILE 97 A HBAcceptor
Thr 264 CT.4 C-term ILE 97 A VdWContact
Gln 265 CT.5 C-term SER 95 A VdWContact
Thr 266 CT.6 C-term SER 95 A HBDonor
Thr 266 CT.6 C-term SER 95 A VdWContact
Pro 267 CT.7 C-term ARG 117 A VdWContact
Lys 268 CT.8 C-term VAL 121 A VdWContact

CHEMOKINE DIAGRAM
R D A C I D Y K Q 30s-loop K G K Y 40s-loop L V K K 50s-loopC-term S E E K A N F C S T H N D E V Y A R F R L Q M R V G V R H S P L Y T P S N M C M L D I V T S N-term L E V H L D V E S P L S L E G D G E I K D V G K N H N M C S L N L N P G
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical