Interactions for 2JP1 — Binding Partner: XCL1


Structure details

  • Chemokine Chain: B
  • Partner Chain: A
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Chemokine diagram

E G S L R A 30s-loop K R G L 40s-loop D P Q A 50s-loopC-term V G S E V S D K R T C V S L T T Q R L P V S R N-term T I T Y T K I V I F I T A C V K T W V R D V V
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Ser 6 58 N-term THR 16 A VdWContact
Asp 7 59 N-term GLN 17 A Hydrophobic
Asp 7 59 N-term GLN 17 A HBAcceptor
Asp 7 59 N-term GLN 17 A VdWContact
Asp 7 59 N-term THR 16 A VdWContact
Thr 10 62 N-term LEU 14 A Hydrophobic
Thr 10 62 N-term LEU 14 A VdWContact
Val 12 68 N-loop LEU 14 A Hydrophobic
Val 12 68 N-loop VAL 12 A Hydrophobic
Val 12 68 N-loop VAL 12 A VdWContact
Leu 14 70 N-loop VAL 47 A Hydrophobic
Leu 14 70 N-loop THR 10 A Hydrophobic
Leu 14 70 N-loop THR 10 A VdWContact
Leu 14 70 N-loop ALA 49 A Hydrophobic
Leu 14 70 N-loop ALA 49 A VdWContact
Leu 14 70 N-loop VAL 12 A Hydrophobic
Thr 15 71 N-loop THR 10 A HBAcceptor
Thr 15 71 N-loop THR 10 A VdWContact
Thr 15 71 N-loop SER 6 A HBDonor
Thr 15 71 N-loop SER 6 A VdWContact
Thr 15 71 N-loop VAL 5 A Hydrophobic
Thr 16 72 N-loop LYS 8 A VdWContact
Thr 16 72 N-loop ALA 49 A Hydrophobic
Thr 16 72 N-loop ALA 49 A VdWContact
Thr 16 72 N-loop PRO 51 A Hydrophobic
Thr 16 72 N-loop PRO 51 A VdWContact
Gln 17 73 N-loop ASP 7 A HBDonor
Gln 17 73 N-loop ASP 7 A VdWContact
Arg 18 74 N-loop LEU 34 A VdWContact
Arg 18 74 N-loop GLN 52 A VdWContact
Arg 18 74 N-loop PRO 51 A Hydrophobic
Leu 19 75 N-loop SER 33 A VdWContact
Leu 19 75 N-loop GLN 52 A VdWContact
Lys 25 84 B1 GLU 31 A Hydrophobic
Lys 25 84 B1 GLU 31 A HBDonor
Lys 25 84 B1 GLU 31 A Cationic
Lys 25 84 B1 GLU 31 A VdWContact
Tyr 27 86 B1 GLU 31 A HBDonor
Tyr 27 86 B1 GLU 31 A VdWContact
Tyr 27 86 B1 ILE 29 A Hydrophobic
Tyr 27 86 B1 ILE 29 A VdWContact
Ile 29 88 B1 TYR 27 A Hydrophobic
Ile 29 88 B1 TYR 27 A VdWContact
Ile 29 88 B1 ILE 38 A Hydrophobic
Ile 29 88 B1 ILE 38 A VdWContact
Ile 29 88 B1 ILE 29 A Hydrophobic
Ile 29 88 B1 ILE 29 A VdWContact
Glu 31 90 30s-loop TYR 27 A Hydrophobic
Glu 31 90 30s-loop TYR 27 A HBAcceptor
Glu 31 90 30s-loop TYR 27 A VdWContact
Glu 31 90 30s-loop LYS 25 A Hydrophobic
Glu 31 90 30s-loop LYS 25 A HBAcceptor
Glu 31 90 30s-loop LYS 25 A Anionic
Glu 31 90 30s-loop LYS 25 A VdWContact
Glu 31 90 30s-loop ILE 40 A Hydrophobic
Glu 31 90 30s-loop ILE 40 A VdWContact
Ser 33 96 30s-loop LEU 19 A VdWContact
Leu 34 97 30s-loop ARG 18 A VdWContact
Leu 34 97 30s-loop ILE 40 A Hydrophobic
Leu 34 97 30s-loop ILE 40 A VdWContact
Ala 36 100 30s-loop LEU 45 A Hydrophobic
Ala 36 100 30s-loop ILE 38 A Hydrophobic
Ile 38 102 B2 ALA 36 A Hydrophobic
Ile 38 102 B2 ILE 38 A Hydrophobic
Ile 38 102 B2 ILE 38 A VdWContact
Ile 38 102 B2 ILE 29 A Hydrophobic
Ile 38 102 B2 ILE 29 A VdWContact
Ile 40 104 B2 GLU 31 A Hydrophobic
Ile 40 104 B2 GLU 31 A VdWContact
Ile 40 104 B2 LEU 34 A Hydrophobic
Ile 40 104 B2 LEU 34 A VdWContact
Leu 45 114 40s-loop VAL 47 A Hydrophobic
Leu 45 114 40s-loop VAL 47 A VdWContact
Leu 45 114 40s-loop ALA 36 A Hydrophobic
Leu 45 114 40s-loop ALA 49 A Hydrophobic
Leu 45 114 40s-loop ALA 49 A VdWContact
Val 47 116 B3 VAL 47 A Hydrophobic
Val 47 116 B3 VAL 47 A VdWContact
Val 47 116 B3 LEU 45 A Hydrophobic
Val 47 116 B3 LEU 45 A VdWContact
Val 47 116 B3 LEU 14 A Hydrophobic
Ala 49 118 B3 LEU 45 A Hydrophobic
Ala 49 118 B3 LEU 45 A VdWContact
Ala 49 118 B3 LEU 14 A Hydrophobic
Ala 49 118 B3 LEU 14 A VdWContact
Pro 51 120 50s-loop ARG 18 A VdWContact
Pro 51 120 50s-loop THR 16 A Hydrophobic
Pro 51 120 50s-loop THR 16 A VdWContact
Pro 51 120 50s-loop GLN 17 A Hydrophobic
Pro 51 120 50s-loop GLN 17 A VdWContact
Gln 52 121 50s-loop ARG 18 A HBDonor
Gln 52 121 50s-loop ARG 18 A VdWContact
Gln 52 121 50s-loop GLN 17 A Hydrophobic
Gln 52 121 50s-loop GLN 17 A HBDonor
Gln 52 121 50s-loop GLN 17 A VdWContact

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