Interactions for 2K01 — Binding Partner: CXCL12


Structure details

  • Chemokine Chain: C
  • Partner Chain: A
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Chemokine diagram

N T P N C A C Q 30s-loop K N N N R 40s-loop D P K L 50s-loopC-term K P V S L S Y R C P C R F F E S H V A R A N N-term L I K L H K V I V A R L I C V Q K W I Q E Y L E K C L N K
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Pro 202 56 N-term HIS 25 A Hydrophobic
Pro 202 56 N-term HIS 25 A VdWContact
Lys 224 84 B1 ASN 30 A HBAcceptor
Lys 224 84 B1 ASN 30 A VdWContact
His 225 85 B1 ILE 28 A VdWContact
His 225 85 B1 PRO 2 A Hydrophobic
His 225 85 B1 LYS 27 A Hydrophobic
Leu 226 86 B1 ILE 28 A Hydrophobic
Leu 226 86 B1 ILE 28 A HBAcceptor
Leu 226 86 B1 ILE 28 A HBDonor
Leu 226 86 B1 ILE 28 A VdWContact
Leu 226 86 B1 LYS 27 A VdWContact
Lys 227 87 B1 LEU 26 A VdWContact
Lys 227 87 B1 HIS 25 A Hydrophobic
Ile 228 88 B1 LEU 26 A Hydrophobic
Ile 228 88 B1 LEU 26 A HBAcceptor
Ile 228 88 B1 LEU 26 A HBDonor
Ile 228 88 B1 LEU 26 A VdWContact
Ile 228 88 B1 TYR 61 A Hydrophobic
Ile 228 88 B1 TYR 61 A HBAcceptor
Ile 228 88 B1 TYR 61 A VdWContact
Ile 228 88 B1 HIS 25 A VdWContact
Leu 229 89 B1 HIS 25 A VdWContact
Asn 230 90 30s-loop LYS 24 A HBDonor
Asn 230 90 30s-loop LYS 24 A VdWContact
Asn 230 90 30s-loop ARG 20 A HBAcceptor
Asn 230 90 30s-loop ARG 20 A VdWContact
Asn 230 90 30s-loop TYR 61 A Hydrophobic
Asn 230 90 30s-loop TYR 61 A VdWContact
Asn 230 90 30s-loop VAL 23 A HBDonor
Asn 230 90 30s-loop VAL 23 A VdWContact
Ala 235 97 30s-loop LYS 68 A Hydrophobic
Ala 235 97 30s-loop LYS 68 A VdWContact
Leu 236 99 30s-loop CYS 65 A Hydrophobic
Leu 236 99 30s-loop CYS 65 A VdWContact
Leu 236 99 30s-loop LYS 64 A Hydrophobic
Ile 238 101 B2 CYS 65 A Hydrophobic
Pro 253 120 50s-loop CYS 65 A Hydrophobic
Pro 253 120 50s-loop CYS 65 A VdWContact
Gln 259 126 Helix CYS 65 A HBDonor
Gln 259 126 Helix CYS 65 A VdWContact
Gln 259 126 Helix LEU 66 A Hydrophobic
Gln 259 126 Helix LEU 66 A VdWContact
Gln 259 126 Helix ASN 67 A VdWContact
Tyr 261 128 Helix ILE 28 A Hydrophobic
Tyr 261 128 Helix ILE 28 A VdWContact
Tyr 261 128 Helix LEU 29 A HBDonor
Tyr 261 128 Helix ASN 30 A Hydrophobic
Tyr 261 128 Helix ASN 30 A HBAcceptor
Tyr 261 128 Helix ASN 30 A HBDonor
Tyr 261 128 Helix ASN 30 A VdWContact
Leu 262 129 Helix CYS 65 A Hydrophobic
Leu 262 129 Helix LEU 62 A Hydrophobic
Leu 262 129 Helix LEU 62 A VdWContact
Leu 262 129 Helix LEU 66 A Hydrophobic
Leu 262 129 Helix LEU 66 A VdWContact
Ala 265 132 Helix ILE 38 A Hydrophobic
Ala 265 132 Helix LEU 62 A Hydrophobic
Ala 265 132 Helix CYS 36 A Hydrophobic
Ala 265 132 Helix CYS 36 A VdWContact
Ala 265 132 Helix PRO 53 A Hydrophobic
Ala 265 132 Helix PRO 53 A VdWContact
Leu 266 133 Helix LEU 62 A Hydrophobic
Leu 266 133 Helix LEU 62 A VdWContact
Leu 266 133 Helix GLN 59 A Hydrophobic
Leu 266 133 Helix GLN 59 A VdWContact
Leu 266 133 Helix LEU 66 A Hydrophobic
Asn 267 134 Helix GLN 59 A HBDonor
Asn 267 134 Helix GLN 59 A VdWContact
Lys 268 135 Helix ALA 35 A Hydrophobic
Lys 268 135 Helix ALA 35 A VdWContact
Lys 268 135 Helix LYS 54 A HBAcceptor
Lys 268 135 Helix LYS 54 A Anionic
Lys 268 135 Helix LYS 54 A VdWContact

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