Interactions

2FJ2 | CXCL2_HHV8P — CXCL2

Residue contacts: 37
SUMMARY
Protein
CXCL2_HHV8P View protein entry
Organism
Human herpesvirus 8 type P (isolate GK18)
UniProt ID
Q98157 View on UniProt
PDB ID
2FJ2 View on PDB
Method
X-ray
Resolution
2.3 Å
Date
Dec. 26, 2006
Reference
10.1002/PROT.21172 Open DOI
State
Dimer
Chain information
Chemokine chain
B
Partner chain
A
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Trp 5 NTc.Cm6 N-term ARG 18 A HBAcceptor
Trp 5 NTc.Cm6 N-term ARG 18 A VdWContact
His 6 NTc.Cm5 N-term CYS 51 A Hydrophobic
His 6 NTc.Cm5 N-term CYS 51 A HBAcceptor
His 6 NTc.Cm5 N-term CYS 51 A VdWContact
His 6 NTc.Cm5 N-term VAL 50 A Hydrophobic
His 6 NTc.Cm5 N-term VAL 50 A VdWContact
His 6 NTc.Cm5 N-term GLY 14 A VdWContact
His 6 NTc.Cm5 N-term TYR 15 A VdWContact
Pro 8 NTc.Cm3 N-term CYS 51 A VdWContact
Pro 8 NTc.Cm3 N-term CYS 11 A VdWContact
Pro 8 NTc.Cm3 N-term ILE 41 A Hydrophobic
Pro 8 NTc.Cm3 N-term GLN 49 A Hydrophobic
Pro 8 NTc.Cm3 N-term LYS 10 A Hydrophobic
Pro 8 NTc.Cm3 N-term LYS 10 A VdWContact
Asp 9 NTc.Cm2 N-term CYS 11 A HBAcceptor
Asp 9 NTc.Cm2 N-term CYS 11 A HBDonor
Asp 9 NTc.Cm2 N-term CYS 11 A VdWContact
Asp 9 NTc.Cm2 N-term LEU 13 A Hydrophobic
Asp 9 NTc.Cm2 N-term LEU 13 A VdWContact
Asp 9 NTc.Cm2 N-term LYS 10 A VdWContact
Lys 10 NTc.Cm1 N-term PRO 8 A Hydrophobic
Lys 10 NTc.Cm1 N-term LYS 10 A Hydrophobic
Cys 11 CX.1 CX CYS 11 A Hydrophobic
Cys 11 CX.1 CX LEU 13 A VdWContact
Cys 11 CX.1 CX ASP 9 A HBAcceptor
Cys 11 CX.1 CX ASP 9 A HBDonor
Cys 11 CX.1 CX ASP 9 A VdWContact
Leu 13 cxb1.1 N-loop LEU 34 A Hydrophobic
Leu 13 cxb1.1 N-loop LEU 34 A VdWContact
Leu 13 cxb1.1 N-loop ASP 9 A VdWContact
Gly 14 cxb1.2 N-loop HIS 6 A VdWContact
Tyr 15 cxb1.5 N-loop HIS 6 A VdWContact
Leu 34 b1b2.10 30s-loop LEU 13 A Hydrophobic
Leu 34 b1b2.10 30s-loop LEU 13 A VdWContact
Ile 41 B2.3 B2 PRO 8 A Hydrophobic
Gln 49 B3.1 B3 PRO 8 A Hydrophobic
CHEMOKINE DIAGRAM
T S Q L C S K P 30s-loop K R G R 40s-loop D K S K 50s-loopC-term W H R P D K C C L G Y Q K R P L P Q V N-term P Y W S S L L G V I F L T A C V Q D W V K K L M Q Q L P V T A R
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical