Interactions for 2MGS — Binding Partner: CXCL5


Structure details

  • Chemokine Chain: B
  • Partner Chain: A
Download Full PDB

3D view

NGL viewer powered by MMTF.


Chemokine diagram

A I G P Q C S K V E 30s-loop K N G K 40s-loop D P E A 50s-loopC-term L R E L R C V C L Q T T Q G V H P K M N-term F V Q L N S I V V A S L L C I E P F L K K V I Q K I L D G G N K E N
Pick color:
 
 
 
 
 
 
 
 
 
 
 
 


Interactions for this Binding Partner

Download list in excel
Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Ser 28 84 B1 ALA 34 A HBAcceptor
Ser 28 84 B1 ALA 34 A VdWContact
Asn 29 85 B1 PHE 33 A Hydrophobic
Asn 29 85 B1 PHE 33 A VdWContact
Asn 29 85 B1 VAL 32 A VdWContact
Leu 30 86 B1 VAL 32 A Hydrophobic
Leu 30 86 B1 VAL 32 A HBAcceptor
Leu 30 86 B1 VAL 32 A HBDonor
Leu 30 86 B1 VAL 32 A VdWContact
Leu 30 86 B1 GLN 31 A VdWContact
Leu 30 86 B1 LEU 71 A Hydrophobic
Gln 31 87 B1 GLN 31 A Hydrophobic
Gln 31 87 B1 GLN 31 A VdWContact
Gln 31 87 B1 LEU 30 A VdWContact
Val 32 88 B1 ASN 29 A VdWContact
Val 32 88 B1 LEU 30 A Hydrophobic
Val 32 88 B1 LEU 30 A HBAcceptor
Val 32 88 B1 LEU 30 A HBDonor
Val 32 88 B1 LEU 30 A VdWContact
Val 32 88 B1 LEU 71 A Hydrophobic
Ala 34 90 30s-loop SER 28 A HBDonor
Ala 34 90 30s-loop SER 28 A VdWContact
Lys 41 97 30s-loop GLU 77 A VdWContact
Lys 41 97 30s-loop ASN 78 A Cationic
Val 42 99 30s-loop GLU 77 A Hydrophobic
Val 42 99 30s-loop GLU 77 A HBDonor
Val 42 99 30s-loop GLY 74 A VdWContact
Pro 58 120 50s-loop ASN 75 A HBAcceptor
Pro 58 120 50s-loop ASN 75 A VdWContact
Leu 71 133 Helix LEU 71 A Hydrophobic
Leu 71 133 Helix LEU 71 A VdWContact
Gly 74 136 C-term VAL 42 A VdWContact
Glu 77 139 C-term ILE 35 A Hydrophobic

Interaction pattern search
Search complexes with similar interaction patterns:

Specify the minimum similarity (0.00 no similarity, 1.00 identical)