Interactions for 1QE6 — Binding Partner: CXCL8
Structure details
- PDB ID: 1QE6 open_in_new
- Protein: CXCL8_HUMAN
- Organism: Homo sapiens
- UniProt ID: P10145 open_in_new
- Method: X-ray
- Resolution: 2.35 Å
- Date: March 22, 2000
- Reference: 2-S open_in_new
- State: Dimer
- Chemokine Chain: A
- Partner Chain: B
Chemokine diagram
Interactions for this Binding Partner
Download list as CSV
| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Lys 23 | B1.3 | B1 | GLU 29 | B | HBAcceptor |
| Lys 23 | B1.3 | B1 | GLU 29 | B | VdWContact |
| Glu 24 | B1.4 | B1 | ILE 28 | B | Hydrophobic |
| Glu 24 | B1.4 | B1 | ILE 28 | B | VdWContact |
| Glu 24 | B1.4 | B1 | ARG 26 | B | HBAcceptor |
| Glu 24 | B1.4 | B1 | ARG 26 | B | Anionic |
| Glu 24 | B1.4 | B1 | ARG 26 | B | VdWContact |
| Glu 24 | B1.4 | B1 | VAL 27 | B | VdWContact |
| Leu 25 | B1.5 | B1 | ARG 26 | B | VdWContact |
| Leu 25 | B1.5 | B1 | VAL 27 | B | Hydrophobic |
| Leu 25 | B1.5 | B1 | VAL 27 | B | HBAcceptor |
| Leu 25 | B1.5 | B1 | VAL 27 | B | HBDonor |
| Leu 25 | B1.5 | B1 | VAL 27 | B | VdWContact |
| Arg 26 | B1.6 | B1 | ARG 26 | B | Hydrophobic |
| Arg 26 | B1.6 | B1 | GLU 24 | B | HBDonor |
| Arg 26 | B1.6 | B1 | GLU 24 | B | Cationic |
| Arg 26 | B1.6 | B1 | GLU 24 | B | VdWContact |
| Arg 26 | B1.6 | B1 | LEU 25 | B | VdWContact |
| Val 27 | B1.7 | B1 | GLU 24 | B | VdWContact |
| Val 27 | B1.7 | B1 | ALA 69 | B | Hydrophobic |
| Val 27 | B1.7 | B1 | PHE 65 | B | Hydrophobic |
| Val 27 | B1.7 | B1 | LEU 25 | B | Hydrophobic |
| Val 27 | B1.7 | B1 | LEU 25 | B | HBAcceptor |
| Val 27 | B1.7 | B1 | LEU 25 | B | HBDonor |
| Val 27 | B1.7 | B1 | LEU 25 | B | VdWContact |
| Val 27 | B1.7 | B1 | LEU 66 | B | Hydrophobic |
| Ile 28 | b1b2.4 | 30s-loop | GLU 24 | B | Hydrophobic |
| Ile 28 | b1b2.4 | 30s-loop | GLU 24 | B | VdWContact |
| Glu 29 | b1b2.6 | 30s-loop | ARG 68 | B | HBAcceptor |
| Glu 29 | b1b2.6 | 30s-loop | ARG 68 | B | Anionic |
| Glu 29 | b1b2.6 | 30s-loop | ARG 68 | B | VdWContact |
| Glu 29 | b1b2.6 | 30s-loop | LYS 23 | B | HBDonor |
| Glu 29 | b1b2.6 | 30s-loop | LYS 23 | B | VdWContact |
| Glu 29 | b1b2.6 | 30s-loop | ALA 69 | B | Hydrophobic |
| Glu 29 | b1b2.6 | 30s-loop | PHE 65 | B | Hydrophobic |
| Ser 30 | b1b2.7 | 30s-loop | SER 72 | B | VdWContact |
| Thr 37 | b1b2.16 | 30s-loop | ALA 69 | B | Hydrophobic |
| Thr 37 | b1b2.16 | 30s-loop | ALA 69 | B | HBDonor |
| Thr 37 | b1b2.16 | 30s-loop | ALA 69 | B | VdWContact |
| Thr 37 | b1b2.16 | 30s-loop | SER 72 | B | VdWContact |
| Val 62 | H.7 | Helix | LEU 66 | B | Hydrophobic |
| Val 62 | H.7 | Helix | LEU 66 | B | VdWContact |
| Glu 63 | H.8 | Helix | GLU 63 | B | VdWContact |
| Phe 65 | H.10 | Helix | VAL 27 | B | Hydrophobic |
| Phe 65 | H.10 | Helix | GLU 29 | B | Hydrophobic |
| Leu 66 | CT.1 | C-term | VAL 27 | B | Hydrophobic |
| Leu 66 | CT.1 | C-term | VAL 27 | B | VdWContact |
| Leu 66 | CT.1 | C-term | VAL 62 | B | Hydrophobic |
| Leu 66 | CT.1 | C-term | LEU 66 | B | Hydrophobic |
| Arg 68 | CT.3 | C-term | GLU 29 | B | HBDonor |
| Arg 68 | CT.3 | C-term | GLU 29 | B | Cationic |
| Arg 68 | CT.3 | C-term | GLU 29 | B | VdWContact |
| Ala 69 | CT.4 | C-term | VAL 27 | B | Hydrophobic |
| Ala 69 | CT.4 | C-term | THR 37 | B | Hydrophobic |
| Ala 69 | CT.4 | C-term | THR 37 | B | HBAcceptor |
| Ala 69 | CT.4 | C-term | THR 37 | B | VdWContact |
| Ala 69 | CT.4 | C-term | GLU 29 | B | Hydrophobic |
| Ala 69 | CT.4 | C-term | GLU 29 | B | VdWContact |
| Glu 70 | CT.5 | C-term | GLN 59 | B | Hydrophobic |
| Glu 70 | CT.5 | C-term | GLN 59 | B | VdWContact |
| Glu 70 | CT.5 | C-term | PRO 53 | B | Hydrophobic |
| Ser 72 | CT.7 | C-term | LYS 54 | B | Anionic |
| Ser 72 | CT.7 | C-term | LYS 54 | B | VdWContact |
| Ser 72 | CT.7 | C-term | THR 37 | B | HBAcceptor |
| Ser 72 | CT.7 | C-term | THR 37 | B | VdWContact |
| Ser 72 | CT.7 | C-term | SER 30 | B | VdWContact |
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